Definition Oceanobacillus iheyensis HTE831, complete genome.
Accession NC_004193
Length 3,630,528

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The map label for this gene is pcrA [H]

Identifier: 23098214

GI number: 23098214

Start: 808280

End: 810505

Strand: Direct

Name: pcrA [H]

Synonym: OB0759

Alternate gene names: 23098214

Gene position: 808280-810505 (Clockwise)

Preceding gene: 23098213

Following gene: 23098215

Centisome position: 22.26

GC content: 37.2

Gene sequence:

>2226_bases
ATGAATCAATCATTGGAAAGTATGATCAATACGTTAAATAAACAACAGCAAGAGGCTGTGCGACATACAGAAGGACCATT
ATTAATTATGGCAGGAGCAGGAAGTGGAAAAACACGTGTGTTAACCCATCGAATCGCATATTTAATGGGAGAAAAAGATG
TATCGCCACGAAATATATTGGCCATTACATTTACGAATAAAGCCGCACGAGAAATGAAAGAACGTGTGAGCAAATTAGTC
GGACCACAGGGAGAATATATGTGGGTATCCACCTTTCACTCCATGTGCGTCCGTATTTTGCGTCGAGACATAGATCGGAT
TGGATATTCAACGAATTTTTCTATCTTAGATAGTAGTGATCAATTATCCGTAATCAAGCAAGTACTAAAAAATTTGAATA
TAGACCCAAAAAAATTCGATCCACGTGCTATGCTGGGACAAATAAGTACAGCAAAAAACGAATTAATTACTGAAGAAGAA
TATTCGAAAAACGCTGGGGATTTCTTTAGTCGTCAAGTGGCTCAAGTATATGAAGGATATCAAAAAATGCTCCGCAAAAA
TCAATCACTCGATTTTGATGACTTAATAATGCAAACCATTCATTTATTCCAACGTATACCAGAAGTGTTGGAATATTATC
AGCGTCGTTTTCAATATATTCATGTGGACGAGTATCAAGATACCAACCATGCACAATATTATTTAGTGAAACAATTAGCT
AGCAGATTTCAAAACCTATGTGTAGTGGGAGATTCTGACCAGTCGATATATCGTTGGAGAGGTGCGGATATTGGTAATAT
CTTAACTTTTGAAAAAGACTATCCTTCTGCTCGTACGGTTTTATTAGAGCAAAATTACCGATCTACAAAATCTATATTAC
AAGCTGCTAATCAAGTGATCTCTAATAACTCTGGCAGAAAGCCGAAAAACTTATGGACGGATAATATTGATGGGAAAAAT
CTAAACTATTATCAAGGCGGAACAGAACAAGAAGAGGCTCTCTTTGTTACAGATAAGATTCAGCAGTTAATAAGAGAGAA
TGAGTATAAACCAAGTGATGTTGCCATTTTATACCGAACAAATGCTCAATCACGTGCGATAGAGGATACTTTATTAAAAT
CAGGTATTAATTATCAAATGGTTGGAGGCATGAAGTTCTACGATCGTAAAGAGATTAAGGACATGATTGCTTATCTAAGA
TTAATTACAAATCCAGATGATGACATTAGTTTTGTACGTGTAGTGAATGAACCGAAACGTGGTGTTGGTAAGACGTCAGT
TGAACGTTTACAAGCGTATGCTGGCGAGCATGATATTTCATTATATGAAGCGGTAAAAGAAGTTGATTTTACAGGAGTAT
CGAAAAAAGCAGCGAATGCGCTAGCGGGCTTTGAAAGTCTTATCCGTACTTTATCGCAACAACAAGAATTCTTAACGGCA
ACAGACATGGTAGAAGCTATATTGGAACGAACGGGCTATGAAGAAATGTTAAAGAATGAGCGCACTATCGAGGCACAAAG
TCGCCTAGAAAACTTAGAAGAATTCATGACAGTTACAAAAGATTTCGAAAAAGCAAGCGAAGATAAAACACTAATCGCCT
TCTTAACGGACCTTGCGTTAGTCGCGGATATTGATCGAGTGGACGAAGAAGATCCAGATCATAATGAAAAAATCACTTTA
ATGACATTACACGCCGCAAAAGGATTAGAATTTCCTGTTGTATTCTTAATTGGAATGGAAGAAAATGTCTTCCCGCATAG
TCGATCTATTATGGATGAAGATGAAATGGAAGAGGAGAGAAGACTTGCTTATGTAGGGATTACCCGTGCAGAAAAAGAAT
TGTATGTAACCCATGCAAAAATGCGTACACTGTATGGTAGAACGAATATGAATCCAATAAGCAGATTTATTAACGAAATA
CCAAAAGAATTAATTGATGGTTTAGAAGAAATAAGTAAACCGATGTTTGGCGCAAAATCTCTCGAACGTTCCCCACAACG
ACCAGCTCCAAAGAAACGACGTGCTGAAAAAATGCAATCTTCTACAGGTGCTGAAAGTAAGGAATGGGCTGTTGGTGAAA
AAGCAAACCATAAAAAGTGGGGCATAGGAACGGTTGTGAAAGTACAAGGCGAAGGAGAAAAAATGGAATTAGATATCGCT
TTTCCTGCACCTATAGGTATTAAACGGTTATTAGCTAAATTTGCACCAATTACGAAGGAAGAATAG

Upstream 100 bases:

>100_bases
CAATCATTGTAGGCAATAGCATCTATACTAATATAAATGAAGCATTAAAAACAGTAGAGGCAGTTAAAGGGAATTAAACA
GTAGTAAGGACGGTGCACGT

Downstream 100 bases:

>100_bases
GGGCAACGAAAATGAATAAAGAACAAGTAAGTAAGAAGATAGAATCCTTAATTGAATTGTTAAATCAATATGGATATGAA
TATTATGTGTTGGATAATCC

Product: ATP-dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MNQSLESMINTLNKQQQEAVRHTEGPLLIMAGAGSGKTRVLTHRIAYLMGEKDVSPRNILAITFTNKAAREMKERVSKLV
GPQGEYMWVSTFHSMCVRILRRDIDRIGYSTNFSILDSSDQLSVIKQVLKNLNIDPKKFDPRAMLGQISTAKNELITEEE
YSKNAGDFFSRQVAQVYEGYQKMLRKNQSLDFDDLIMQTIHLFQRIPEVLEYYQRRFQYIHVDEYQDTNHAQYYLVKQLA
SRFQNLCVVGDSDQSIYRWRGADIGNILTFEKDYPSARTVLLEQNYRSTKSILQAANQVISNNSGRKPKNLWTDNIDGKN
LNYYQGGTEQEEALFVTDKIQQLIRENEYKPSDVAILYRTNAQSRAIEDTLLKSGINYQMVGGMKFYDRKEIKDMIAYLR
LITNPDDDISFVRVVNEPKRGVGKTSVERLQAYAGEHDISLYEAVKEVDFTGVSKKAANALAGFESLIRTLSQQQEFLTA
TDMVEAILERTGYEEMLKNERTIEAQSRLENLEEFMTVTKDFEKASEDKTLIAFLTDLALVADIDRVDEEDPDHNEKITL
MTLHAAKGLEFPVVFLIGMEENVFPHSRSIMDEDEMEEERRLAYVGITRAEKELYVTHAKMRTLYGRTNMNPISRFINEI
PKELIDGLEEISKPMFGAKSLERSPQRPAPKKRRAEKMQSSTGAESKEWAVGEKANHKKWGIGTVVKVQGEGEKMELDIA
FPAPIGIKRLLAKFAPITKEE

Sequences:

>Translated_741_residues
MNQSLESMINTLNKQQQEAVRHTEGPLLIMAGAGSGKTRVLTHRIAYLMGEKDVSPRNILAITFTNKAAREMKERVSKLV
GPQGEYMWVSTFHSMCVRILRRDIDRIGYSTNFSILDSSDQLSVIKQVLKNLNIDPKKFDPRAMLGQISTAKNELITEEE
YSKNAGDFFSRQVAQVYEGYQKMLRKNQSLDFDDLIMQTIHLFQRIPEVLEYYQRRFQYIHVDEYQDTNHAQYYLVKQLA
SRFQNLCVVGDSDQSIYRWRGADIGNILTFEKDYPSARTVLLEQNYRSTKSILQAANQVISNNSGRKPKNLWTDNIDGKN
LNYYQGGTEQEEALFVTDKIQQLIRENEYKPSDVAILYRTNAQSRAIEDTLLKSGINYQMVGGMKFYDRKEIKDMIAYLR
LITNPDDDISFVRVVNEPKRGVGKTSVERLQAYAGEHDISLYEAVKEVDFTGVSKKAANALAGFESLIRTLSQQQEFLTA
TDMVEAILERTGYEEMLKNERTIEAQSRLENLEEFMTVTKDFEKASEDKTLIAFLTDLALVADIDRVDEEDPDHNEKITL
MTLHAAKGLEFPVVFLIGMEENVFPHSRSIMDEDEMEEERRLAYVGITRAEKELYVTHAKMRTLYGRTNMNPISRFINEI
PKELIDGLEEISKPMFGAKSLERSPQRPAPKKRRAEKMQSSTGAESKEWAVGEKANHKKWGIGTVVKVQGEGEKMELDIA
FPAPIGIKRLLAKFAPITKEE
>Mature_741_residues
MNQSLESMINTLNKQQQEAVRHTEGPLLIMAGAGSGKTRVLTHRIAYLMGEKDVSPRNILAITFTNKAAREMKERVSKLV
GPQGEYMWVSTFHSMCVRILRRDIDRIGYSTNFSILDSSDQLSVIKQVLKNLNIDPKKFDPRAMLGQISTAKNELITEEE
YSKNAGDFFSRQVAQVYEGYQKMLRKNQSLDFDDLIMQTIHLFQRIPEVLEYYQRRFQYIHVDEYQDTNHAQYYLVKQLA
SRFQNLCVVGDSDQSIYRWRGADIGNILTFEKDYPSARTVLLEQNYRSTKSILQAANQVISNNSGRKPKNLWTDNIDGKN
LNYYQGGTEQEEALFVTDKIQQLIRENEYKPSDVAILYRTNAQSRAIEDTLLKSGINYQMVGGMKFYDRKEIKDMIAYLR
LITNPDDDISFVRVVNEPKRGVGKTSVERLQAYAGEHDISLYEAVKEVDFTGVSKKAANALAGFESLIRTLSQQQEFLTA
TDMVEAILERTGYEEMLKNERTIEAQSRLENLEEFMTVTKDFEKASEDKTLIAFLTDLALVADIDRVDEEDPDHNEKITL
MTLHAAKGLEFPVVFLIGMEENVFPHSRSIMDEDEMEEERRLAYVGITRAEKELYVTHAKMRTLYGRTNMNPISRFINEI
PKELIDGLEEISKPMFGAKSLERSPQRPAPKKRRAEKMQSSTGAESKEWAVGEKANHKKWGIGTVVKVQGEGEKMELDIA
FPAPIGIKRLLAKFAPITKEE

Specific function: DNA helicase used for plasmid rolling-circle replication and also involved in UV repair [H]

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 uvrD-like helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI2367296, Length=733, Percent_Identity=40.3819918144611, Blast_Score=550, Evalue=1e-157,
Organism=Escherichia coli, GI48994965, Length=644, Percent_Identity=39.9068322981366, Blast_Score=428, Evalue=1e-121,
Organism=Escherichia coli, GI1787196, Length=345, Percent_Identity=26.9565217391304, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6322369, Length=740, Percent_Identity=28.6486486486486, Blast_Score=233, Evalue=8e-62,
Organism=Saccharomyces cerevisiae, GI6324477, Length=682, Percent_Identity=23.1671554252199, Blast_Score=119, Evalue=1e-27,

Paralogues:

None

Copy number: 3000 [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005751
- InterPro:   IPR013986
- InterPro:   IPR014017
- InterPro:   IPR000212
- InterPro:   IPR014016 [H]

Pfam domain/function: PF00580 UvrD-helicase [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 84901; Mature: 84901

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSLESMINTLNKQQQEAVRHTEGPLLIMAGAGSGKTRVLTHRIAYLMGEKDVSPRNIL
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEE
AITFTNKAAREMKERVSKLVGPQGEYMWVSTFHSMCVRILRRDIDRIGYSTNFSILDSSD
EEEECCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCH
QLSVIKQVLKNLNIDPKKFDPRAMLGQISTAKNELITEEEYSKNAGDFFSRQVAQVYEGY
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
QKMLRKNQSLDFDDLIMQTIHLFQRIPEVLEYYQRRFQYIHVDEYQDTNHAQYYLVKQLA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHH
SRFQNLCVVGDSDQSIYRWRGADIGNILTFEKDYPSARTVLLEQNYRSTKSILQAANQVI
HHHHCEEEECCCCCCEEEECCCCCCCEEEECCCCCCHHEEEECCCCHHHHHHHHHHHHHH
SNNSGRKPKNLWTDNIDGKNLNYYQGGTEQEEALFVTDKIQQLIRENEYKPSDVAILYRT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NAQSRAIEDTLLKSGINYQMVGGMKFYDRKEIKDMIAYLRLITNPDDDISFVRVVNEPKR
CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GVGKTSVERLQAYAGEHDISLYEAVKEVDFTGVSKKAANALAGFESLIRTLSQQQEFLTA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDMVEAILERTGYEEMLKNERTIEAQSRLENLEEFMTVTKDFEKASEDKTLIAFLTDLAL
HHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VADIDRVDEEDPDHNEKITLMTLHAAKGLEFPVVFLIGMEENVFPHSRSIMDEDEMEEER
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
RLAYVGITRAEKELYVTHAKMRTLYGRTNMNPISRFINEIPKELIDGLEEISKPMFGAKS
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LERSPQRPAPKKRRAEKMQSSTGAESKEWAVGEKANHKKWGIGTVVKVQGEGEKMELDIA
HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
FPAPIGIKRLLAKFAPITKEE
CCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNQSLESMINTLNKQQQEAVRHTEGPLLIMAGAGSGKTRVLTHRIAYLMGEKDVSPRNIL
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEE
AITFTNKAAREMKERVSKLVGPQGEYMWVSTFHSMCVRILRRDIDRIGYSTNFSILDSSD
EEEECCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCH
QLSVIKQVLKNLNIDPKKFDPRAMLGQISTAKNELITEEEYSKNAGDFFSRQVAQVYEGY
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
QKMLRKNQSLDFDDLIMQTIHLFQRIPEVLEYYQRRFQYIHVDEYQDTNHAQYYLVKQLA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHH
SRFQNLCVVGDSDQSIYRWRGADIGNILTFEKDYPSARTVLLEQNYRSTKSILQAANQVI
HHHHCEEEECCCCCCEEEECCCCCCCEEEECCCCCCHHEEEECCCCHHHHHHHHHHHHHH
SNNSGRKPKNLWTDNIDGKNLNYYQGGTEQEEALFVTDKIQQLIRENEYKPSDVAILYRT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NAQSRAIEDTLLKSGINYQMVGGMKFYDRKEIKDMIAYLRLITNPDDDISFVRVVNEPKR
CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GVGKTSVERLQAYAGEHDISLYEAVKEVDFTGVSKKAANALAGFESLIRTLSQQQEFLTA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDMVEAILERTGYEEMLKNERTIEAQSRLENLEEFMTVTKDFEKASEDKTLIAFLTDLAL
HHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VADIDRVDEEDPDHNEKITLMTLHAAKGLEFPVVFLIGMEENVFPHSRSIMDEDEMEEER
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
RLAYVGITRAEKELYVTHAKMRTLYGRTNMNPISRFINEIPKELIDGLEEISKPMFGAKS
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LERSPQRPAPKKRRAEKMQSSTGAESKEWAVGEKANHKKWGIGTVVKVQGEGEKMELDIA
HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
FPAPIGIKRLLAKFAPITKEE
CCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9701819; 9384377 [H]