Definition | Oceanobacillus iheyensis HTE831, complete genome. |
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Accession | NC_004193 |
Length | 3,630,528 |
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The map label for this gene is purN [H]
Identifier: 23098203
GI number: 23098203
Start: 796247
End: 796816
Strand: Direct
Name: purN [H]
Synonym: OB0748
Alternate gene names: 23098203
Gene position: 796247-796816 (Clockwise)
Preceding gene: 23098202
Following gene: 23098204
Centisome position: 21.93
GC content: 36.84
Gene sequence:
>570_bases ATGACTATAAAAGCAGCTGTTTTTGCTTCAGGTGCGGGTAGTAATTTTGAGGCAATAATGGAAGCAAACGATTTGAAGTG TAAGATTTCTCTTCTCGTATGCGATAAACCAGGAGCATTAGTGATAGATAAAGCAGCGCGTTATGGTATTCCCACATTGG TCTTTAATCCAAAGGAATACGGTTCAAAGTCTGAATACGAAGAAATGATTCACCGTCATTTACAACATTATGGAATTTCA TGGATTTTTTTAGCAGGGTATATGCGACTGATTGGCGATACGCTGCTGAATGAATATGAAAGTAAAATCTTAAATATACA CCCTTCTTTACTGCCATTTTTTCCTGGAAAAGATGCTATTGGTCAAGCATATGATGCGGGAGCAAGAGAAACAGGGGTTA GCATTCATTATGTTGATGCAGGGATGGATACGGGACCTGTTATTGCTCAGGAAAGCGTCATGATCGAAGAAAATGATACA AAAGAAAAATTAAAAGAACGTATACAGAAGGTAGAACATCAACTTTATCCAACAGTAATTAATCAAGTATTGTCTAATAA AGTGAGGTAA
Upstream 100 bases:
>100_bases AAGAAGATGTTTCTATCGCATTACAGTTACTCGAAAAAGTAGATGAACAAGCATATGTGATTGGTAAGGTAACAGAGGAG GAAGGAGTGCACTTTACATT
Downstream 100 bases:
>100_bases TAACAATGAGTAAACGTGCGTTAATTAGTGTGTCAGATAAAACAAATATAATCGAATTTGCCAAAGGTCTCAAAGAAAGT GGATTCGAAATCTTATCTAC
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTIKAAVFASGAGSNFEAIMEANDLKCKISLLVCDKPGALVIDKAARYGIPTLVFNPKEYGSKSEYEEMIHRHLQHYGIS WIFLAGYMRLIGDTLLNEYESKILNIHPSLLPFFPGKDAIGQAYDAGARETGVSIHYVDAGMDTGPVIAQESVMIEENDT KEKLKERIQKVEHQLYPTVINQVLSNKVR
Sequences:
>Translated_189_residues MTIKAAVFASGAGSNFEAIMEANDLKCKISLLVCDKPGALVIDKAARYGIPTLVFNPKEYGSKSEYEEMIHRHLQHYGIS WIFLAGYMRLIGDTLLNEYESKILNIHPSLLPFFPGKDAIGQAYDAGARETGVSIHYVDAGMDTGPVIAQESVMIEENDT KEKLKERIQKVEHQLYPTVINQVLSNKVR >Mature_188_residues TIKAAVFASGAGSNFEAIMEANDLKCKISLLVCDKPGALVIDKAARYGIPTLVFNPKEYGSKSEYEEMIHRHLQHYGISW IFLAGYMRLIGDTLLNEYESKILNIHPSLLPFFPGKDAIGQAYDAGARETGVSIHYVDAGMDTGPVIAQESVMIEENDTK EKLKERIQKVEHQLYPTVINQVLSNKVR
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=189, Percent_Identity=35.978835978836, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI209869995, Length=189, Percent_Identity=35.978835978836, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI209869993, Length=189, Percent_Identity=35.978835978836, Blast_Score=139, Evalue=2e-33, Organism=Escherichia coli, GI1788846, Length=187, Percent_Identity=34.2245989304813, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1787483, Length=190, Percent_Identity=26.8421052631579, Blast_Score=78, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17567511, Length=181, Percent_Identity=34.8066298342541, Blast_Score=127, Evalue=3e-30, Organism=Drosophila melanogaster, GI24582400, Length=188, Percent_Identity=35.1063829787234, Blast_Score=141, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 21060; Mature: 20929
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00373 GART
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKAAVFASGAGSNFEAIMEANDLKCKISLLVCDKPGALVIDKAARYGIPTLVFNPKEY CCEEEEEEECCCCCCHHEEECCCCCEEEEEEEEECCCCCEEEECHHHCCCCEEEECCHHH GSKSEYEEMIHRHLQHYGISWIFLAGYMRLIGDTLLNEYESKILNIHPSLLPFFPGKDAI CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH GQAYDAGARETGVSIHYVDAGMDTGPVIAQESVMIEENDTKEKLKERIQKVEHQLYPTVI HHHHCCCCCCCCCEEEEEECCCCCCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHH NQVLSNKVR HHHHHHCCC >Mature Secondary Structure TIKAAVFASGAGSNFEAIMEANDLKCKISLLVCDKPGALVIDKAARYGIPTLVFNPKEY CEEEEEEECCCCCCHHEEECCCCCEEEEEEEEECCCCCEEEECHHHCCCCEEEECCHHH GSKSEYEEMIHRHLQHYGISWIFLAGYMRLIGDTLLNEYESKILNIHPSLLPFFPGKDAI CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH GQAYDAGARETGVSIHYVDAGMDTGPVIAQESVMIEENDTKEKLKERIQKVEHQLYPTVI HHHHCCCCCCCCCEEEEEECCCCCCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHH NQVLSNKVR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]