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The map label for this gene is 23097924

Identifier: 23097924

GI number: 23097924

Start: 497193

End: 498017

Strand: Direct

Name: 23097924

Synonym: OB0469

Alternate gene names: NA

Gene position: 497193-498017 (Clockwise)

Preceding gene: 23097922

Following gene: 23097925

Centisome position: 13.69

GC content: 36.73

Gene sequence:

>825_bases
GTGAGTAGACAAGCAACATTAGATAAAGAAGCAATGAAGGTACTCAAAGAAACTAGTCGAACATTTTACATTCCAATAAA
GCTGCTGAATAAAACATTAAGGAAAACAGTTGGTTCAGCATATCTTTGTATGCGTGCGATTGATGAAATGGAGGATCATG
AGGCGTTGGATTCTTCGAGTAAGCAGGAGTTATTAATCCAGACAAGTCAATTATTACAAGCGGAAACGTTTGATAATGTT
GCTTACCAATCATTAATTGATCCGTACCGTGATATACTCCCGGAAGTAACTATTCGTTTAAATGATTGGTTACTATTTTG
TCCTTCGGATATTGTTACGCAAGTCAAGTCTTCCACAAGTGAAATGGCAGAAGGAATGGCGAAATGGGTAGCTAGAGACT
GGGAAGTAAACACCAAAGAAGACTTAGATGAATATACGTATTATGTTGCTGGGTTAGTCGGTGTAATGCTATCAGATATA
TGGAAGTGGTATGACGGAACGGAGACAGATCGTGAATTAGCTATTGGATACGGCAGAGGTTTACAGGCTGTGAATATATT
AAGAAATATTGATGAAGATGCTGAACGCGGAGTAGGTTTCTTCCCGGATGATTGGACCAAAAAAGAAATGTTTGAATATG
CAAATATGAATTTACATATGGGTGAACAATATATGGAACAAATTTCCACAAAGAATATTTTATTATTCTGTCGTATCCCA
TTAGCACTTGCGCAAAAAACATTGACCGCATTGGAAAAAGGTAAGGAAAAAATATCGCGGGATGAAGTGGAAAATACAGT
TGATCACATTATAAATTCAAAATAG

Upstream 100 bases:

>100_bases
TTATTTACAAATTTTTTACACGGCACAATTAAAAAGGAAAAAAAGTGTTGTGTTTGTTATACTTGTACTATCGCATGAAT
CGGACAAGGAGGAATCTTTG

Downstream 100 bases:

>100_bases
GTAGTGCTTAACTGTAGATTTTAAAAGATAAGACCTTTTATAATAAAAAGCCAAATTTCTCAAAAGTAATCTGAGAAATT
TGGCTTTTTTGTAGTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Farnesyl-Diphosphate Farnesyltransferase; Squalene And Phytoene Synthase; Phytoene/Squalene Synthetase; Squalene And Phytoene Synthases Superfamily; Squalene/Phytoene Synthase-Like Protein; SQS PSY Squalene/Phytoene Synthase-Like Protein; Squalene Synthase; Terpenoid Synthase

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSRQATLDKEAMKVLKETSRTFYIPIKLLNKTLRKTVGSAYLCMRAIDEMEDHEALDSSSKQELLIQTSQLLQAETFDNV
AYQSLIDPYRDILPEVTIRLNDWLLFCPSDIVTQVKSSTSEMAEGMAKWVARDWEVNTKEDLDEYTYYVAGLVGVMLSDI
WKWYDGTETDRELAIGYGRGLQAVNILRNIDEDAERGVGFFPDDWTKKEMFEYANMNLHMGEQYMEQISTKNILLFCRIP
LALAQKTLTALEKGKEKISRDEVENTVDHIINSK

Sequences:

>Translated_274_residues
MSRQATLDKEAMKVLKETSRTFYIPIKLLNKTLRKTVGSAYLCMRAIDEMEDHEALDSSSKQELLIQTSQLLQAETFDNV
AYQSLIDPYRDILPEVTIRLNDWLLFCPSDIVTQVKSSTSEMAEGMAKWVARDWEVNTKEDLDEYTYYVAGLVGVMLSDI
WKWYDGTETDRELAIGYGRGLQAVNILRNIDEDAERGVGFFPDDWTKKEMFEYANMNLHMGEQYMEQISTKNILLFCRIP
LALAQKTLTALEKGKEKISRDEVENTVDHIINSK
>Mature_273_residues
SRQATLDKEAMKVLKETSRTFYIPIKLLNKTLRKTVGSAYLCMRAIDEMEDHEALDSSSKQELLIQTSQLLQAETFDNVA
YQSLIDPYRDILPEVTIRLNDWLLFCPSDIVTQVKSSTSEMAEGMAKWVARDWEVNTKEDLDEYTYYVAGLVGVMLSDIW
KWYDGTETDRELAIGYGRGLQAVNILRNIDEDAERGVGFFPDDWTKKEMFEYANMNLHMGEQYMEQISTKNILLFCRIPL
ALAQKTLTALEKGKEKISRDEVENTVDHIINSK

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI67089147, Length=286, Percent_Identity=25.8741258741259, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321984, Length=290, Percent_Identity=26.2068965517241, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31566; Mature: 31435

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQATLDKEAMKVLKETSRTFYIPIKLLNKTLRKTVGSAYLCMRAIDEMEDHEALDSSS
CCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KQELLIQTSQLLQAETFDNVAYQSLIDPYRDILPEVTIRLNDWLLFCPSDIVTQVKSSTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHHH
EMAEGMAKWVARDWEVNTKEDLDEYTYYVAGLVGVMLSDIWKWYDGTETDRELAIGYGRG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
LQAVNILRNIDEDAERGVGFFPDDWTKKEMFEYANMNLHMGEQYMEQISTKNILLFCRIP
HHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECH
LALAQKTLTALEKGKEKISRDEVENTVDHIINSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRQATLDKEAMKVLKETSRTFYIPIKLLNKTLRKTVGSAYLCMRAIDEMEDHEALDSSS
CCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KQELLIQTSQLLQAETFDNVAYQSLIDPYRDILPEVTIRLNDWLLFCPSDIVTQVKSSTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHHH
EMAEGMAKWVARDWEVNTKEDLDEYTYYVAGLVGVMLSDIWKWYDGTETDRELAIGYGRG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
LQAVNILRNIDEDAERGVGFFPDDWTKKEMFEYANMNLHMGEQYMEQISTKNILLFCRIP
HHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECH
LALAQKTLTALEKGKEKISRDEVENTVDHIINSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA