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The map label for this gene is ylbC [H]

Identifier: 23097843

GI number: 23097843

Start: 411948

End: 413081

Strand: Direct

Name: ylbC [H]

Synonym: OB0388

Alternate gene names: 23097843

Gene position: 411948-413081 (Clockwise)

Preceding gene: 23097842

Following gene: 23097845

Centisome position: 11.35

GC content: 36.07

Gene sequence:

>1134_bases
TTGTTTTTACTGCTGTTAATAATATTATTGGCTTTTTGGACAAAACCATATTGGGAAGATACTGTTCGTGAAATTATTCC
TGAATCAGTCAGTGACACCTTTCATTCTGCAACGGATGATCTTACGAATCAAAATATTGATTATGAATTTGACTTTGACT
TCGATAGAGTAAAAGATCAGGTTTCTATGCTTTACTCGTCCGTTATTGATTCTATTCAAAATGCAGAGCAAGAACCTCAG
ACAGAACCAGTAGAAAAGCCTGAATTGACAACTCCTGATGAACAATCATTTTCTGTTGGGAATGTAGAACTAGGAGATAC
AAAAGCCGTAGTCGAAGAGATGTATGGAGAACCCATGCGTGAAAATGCAAACGAGTATGGAGTACAATGGTCTACTTATC
ATGAAAATTATCAAAATTTTATGATGGTTGCATATGATGAGCAAGATGTAGTGCGAGGGTTATTTACTAATCAGGATTTA
ATTTCTTCACAGCATAATGTAGAATTAGGTGTTCCGAAAACCGTTGTAAATGAAGCACTTGGTGAGCCAGAGGAAGTAAT
TCGTAATGGTTGGTTTAACTATCAAATCAATAGCGAAGGTGAATATGATATCTATCACATGGATGGGAGTTATGTTACTG
TTTTCTATGACATTCATGAAAACGATGAAATGACAGCTATTCAATTAATAGATGAGAACTTAGAGTCCTCAAAAAAAGCA
CTCTATACGCCTAGTAGTGAGTCATTAAAAGAAGGTTTTGAATATCAGTTATTTGACTTAACCAATGCTACTCGCGTAAA
CCATGGATTATCAGTATTAGAATGGAATGAAAATGTACGGGAAACTGCAAGGGATCACAGTACGGATATGGCAGAGAATC
AATACTTTAGTCATACTAATCAAGAGGGGCAGTCACCTTTTGATCGAATGCGAGAAGATGAGATATCCTTTTTAAATGCT
GGAGAAAATTTAGCCTATGGGCAGTTTAGTAGTATATTTGCTCATCAGGGTCTAATGAATTCGCAAGGTCACCGTGAGAA
TATCGTAAATAATAGATTTACCGAGTTAGGGATTGGTGTGGACTTTAACGACGACAATCAGCCGTTTTACACGGAGAATT
TTTTAGATAAGTAA

Upstream 100 bases:

>100_bases
TGAATAATAGCTTTAATCTATTTAGATTACTAGAAACTTCGAATAAAAAGTAATTAACTAAATGAAAAACTAAAAGGTTG
GGATAGAAATTATAAAGCGA

Downstream 100 bases:

>100_bases
TATTTTAATCGTTTGGTGTTACTAGCCAAGCGATTTTTTATTACATATTAGGAAAAGAGATTGGGAAAAAGAATATGAAT
GATATGTTTACAAAAACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MFLLLLIILLAFWTKPYWEDTVREIIPESVSDTFHSATDDLTNQNIDYEFDFDFDRVKDQVSMLYSSVIDSIQNAEQEPQ
TEPVEKPELTTPDEQSFSVGNVELGDTKAVVEEMYGEPMRENANEYGVQWSTYHENYQNFMMVAYDEQDVVRGLFTNQDL
ISSQHNVELGVPKTVVNEALGEPEEVIRNGWFNYQINSEGEYDIYHMDGSYVTVFYDIHENDEMTAIQLIDENLESSKKA
LYTPSSESLKEGFEYQLFDLTNATRVNHGLSVLEWNENVRETARDHSTDMAENQYFSHTNQEGQSPFDRMREDEISFLNA
GENLAYGQFSSIFAHQGLMNSQGHRENIVNNRFTELGIGVDFNDDNQPFYTENFLDK

Sequences:

>Translated_377_residues
MFLLLLIILLAFWTKPYWEDTVREIIPESVSDTFHSATDDLTNQNIDYEFDFDFDRVKDQVSMLYSSVIDSIQNAEQEPQ
TEPVEKPELTTPDEQSFSVGNVELGDTKAVVEEMYGEPMRENANEYGVQWSTYHENYQNFMMVAYDEQDVVRGLFTNQDL
ISSQHNVELGVPKTVVNEALGEPEEVIRNGWFNYQINSEGEYDIYHMDGSYVTVFYDIHENDEMTAIQLIDENLESSKKA
LYTPSSESLKEGFEYQLFDLTNATRVNHGLSVLEWNENVRETARDHSTDMAENQYFSHTNQEGQSPFDRMREDEISFLNA
GENLAYGQFSSIFAHQGLMNSQGHRENIVNNRFTELGIGVDFNDDNQPFYTENFLDK
>Mature_377_residues
MFLLLLIILLAFWTKPYWEDTVREIIPESVSDTFHSATDDLTNQNIDYEFDFDFDRVKDQVSMLYSSVIDSIQNAEQEPQ
TEPVEKPELTTPDEQSFSVGNVELGDTKAVVEEMYGEPMRENANEYGVQWSTYHENYQNFMMVAYDEQDVVRGLFTNQDL
ISSQHNVELGVPKTVVNEALGEPEEVIRNGWFNYQINSEGEYDIYHMDGSYVTVFYDIHENDEMTAIQLIDENLESSKKA
LYTPSSESLKEGFEYQLFDLTNATRVNHGLSVLEWNENVRETARDHSTDMAENQYFSHTNQEGQSPFDRMREDEISFLNA
GENLAYGQFSSIFAHQGLMNSQGHRENIVNNRFTELGIGVDFNDDNQPFYTENFLDK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 43645; Mature: 43645

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLLLIILLAFWTKPYWEDTVREIIPESVSDTFHSATDDLTNQNIDYEFDFDFDRVKDQ
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHH
VSMLYSSVIDSIQNAEQEPQTEPVEKPELTTPDEQSFSVGNVELGDTKAVVEEMYGEPMR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCHHH
ENANEYGVQWSTYHENYQNFMMVAYDEQDVVRGLFTNQDLISSQHNVELGVPKTVVNEAL
CCHHHHCCEEEHHHHCCCCEEEEEECHHHHHHHHHCCHHHHCCCCCEEECCCHHHHHHHC
GEPEEVIRNGWFNYQINSEGEYDIYHMDGSYVTVFYDIHENDEMTAIQLIDENLESSKKA
CCHHHHHHCCCEEEEECCCCCEEEEEECCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCE
LYTPSSESLKEGFEYQLFDLTNATRVNHGLSVLEWNENVRETARDHSTDMAENQYFSHTN
EECCCHHHHHCCCCEEEEECCCCHHHHCCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCC
QEGQSPFDRMREDEISFLNAGENLAYGQFSSIFAHQGLMNSQGHRENIVNNRFTELGIGV
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHEECEE
DFNDDNQPFYTENFLDK
EECCCCCCEECHHCCCC
>Mature Secondary Structure
MFLLLLIILLAFWTKPYWEDTVREIIPESVSDTFHSATDDLTNQNIDYEFDFDFDRVKDQ
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHH
VSMLYSSVIDSIQNAEQEPQTEPVEKPELTTPDEQSFSVGNVELGDTKAVVEEMYGEPMR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCHHH
ENANEYGVQWSTYHENYQNFMMVAYDEQDVVRGLFTNQDLISSQHNVELGVPKTVVNEAL
CCHHHHCCEEEHHHHCCCCEEEEEECHHHHHHHHHCCHHHHCCCCCEEECCCHHHHHHHC
GEPEEVIRNGWFNYQINSEGEYDIYHMDGSYVTVFYDIHENDEMTAIQLIDENLESSKKA
CCHHHHHHCCCEEEEECCCCCEEEEEECCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCE
LYTPSSESLKEGFEYQLFDLTNATRVNHGLSVLEWNENVRETARDHSTDMAENQYFSHTN
EECCCHHHHHCCCCEEEEECCCCHHHHCCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCC
QEGQSPFDRMREDEISFLNAGENLAYGQFSSIFAHQGLMNSQGHRENIVNNRFTELGIGV
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHEECEE
DFNDDNQPFYTENFLDK
EECCCCCCEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]