Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918351
Identifier: 229918351
GI number: 229918351
Start: 2600260
End: 2601171
Strand: Direct
Name: 229918351
Synonym: EAT1b_2636
Alternate gene names: NA
Gene position: 2600260-2601171 (Clockwise)
Preceding gene: 229918350
Following gene: 229918352
Centisome position: 86.68
GC content: 51.64
Gene sequence:
>912_bases ATGGAGAAGGAAAAGGACCAGGACTATCCGTTCCCGGGGAATTGGGCGCGTCTGCATAAGATGATTCAGGAGGCAGATGC TTCTGGGGAACGACAGCGGATCGAACCGATTTTATGGGATTGGTATCAGACGATTCCAGGTGACCCGTTTATTTTCATGG AAATCTTCCAATGTGCAATGGAACGACCGGACGACCCGGAGACACTCGAGAAACTGCAGGAACTTGTCGGCATCCATGTG GCCGAGGCGGAAGAACCGGCCTCAGGAGGGCTGCAGATTGCGCAGTATTACATCATGCGGGACCAACCGTTTGAAGCGGC GCACTGGATCAACCAGTATCTCGAATGGCAGGACAAGAAGGATACGGTCAACACCCAGGCACACCAGGTACTTCAAGTGT TGAAGATGACCGAGTTTCCGGCGGCGATCGCCAAGTTGAAGCGAACGCTGACGCGAGGGAGTACGGGGGAACAGATTGAA GCGTTACAACATGTTCACTTTCAAATCGACCCCGTGCTCGACAATGTGCTTCATGAATTGCTCGTGTCGGAGCGTCCGAA GCTCGTCAAACTGATCGTGTTGGAAAAAGCGTACGCCGAACTAGAAGTCATCGAATGGACGGATGGGGACACTTCGAACA AGATGACACAAGCGGAAGCGAAAGCGCAGATTGAAACGTGGGAGAAGACCGTCTTTTCTCTTCAAAAATCAGTTGAGGGC GATGAGATCGGGACCCAGCTGTTGATGAATTACATGTATACGCATTATCCATATGTGCCGGCCGAAAAAGCGGACGTGGA ACAGGCGCTCGTACAGGCGAAACAAGCGATTTTACATGACGAATCAGTCGACGGTTTAGCCGCGGCGATTTTAGAGGCGG ATCTTCGCTTTACACAGGCGTTATTAGACTAA
Upstream 100 bases:
>100_bases CTACGGAGAACGTCTCTTTTTTCATTTTCCGGGAAATCGATTGACAAGGAATCGCGTCCTAACGGAAGATGAAGGGGAAT GGAAGAGAGGGTGAGGGAAG
Downstream 100 bases:
>100_bases ATCCTTGTGTGCTTACCGAGGATTTATGCTATAATACGGATTGTTGTACATTTTTGTACGGTATAAACGAATTGTTGGAG GGACTTAGCATGACAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MEKEKDQDYPFPGNWARLHKMIQEADASGERQRIEPILWDWYQTIPGDPFIFMEIFQCAMERPDDPETLEKLQELVGIHV AEAEEPASGGLQIAQYYIMRDQPFEAAHWINQYLEWQDKKDTVNTQAHQVLQVLKMTEFPAAIAKLKRTLTRGSTGEQIE ALQHVHFQIDPVLDNVLHELLVSERPKLVKLIVLEKAYAELEVIEWTDGDTSNKMTQAEAKAQIETWEKTVFSLQKSVEG DEIGTQLLMNYMYTHYPYVPAEKADVEQALVQAKQAILHDESVDGLAAAILEADLRFTQALLD
Sequences:
>Translated_303_residues MEKEKDQDYPFPGNWARLHKMIQEADASGERQRIEPILWDWYQTIPGDPFIFMEIFQCAMERPDDPETLEKLQELVGIHV AEAEEPASGGLQIAQYYIMRDQPFEAAHWINQYLEWQDKKDTVNTQAHQVLQVLKMTEFPAAIAKLKRTLTRGSTGEQIE ALQHVHFQIDPVLDNVLHELLVSERPKLVKLIVLEKAYAELEVIEWTDGDTSNKMTQAEAKAQIETWEKTVFSLQKSVEG DEIGTQLLMNYMYTHYPYVPAEKADVEQALVQAKQAILHDESVDGLAAAILEADLRFTQALLD >Mature_303_residues MEKEKDQDYPFPGNWARLHKMIQEADASGERQRIEPILWDWYQTIPGDPFIFMEIFQCAMERPDDPETLEKLQELVGIHV AEAEEPASGGLQIAQYYIMRDQPFEAAHWINQYLEWQDKKDTVNTQAHQVLQVLKMTEFPAAIAKLKRTLTRGSTGEQIE ALQHVHFQIDPVLDNVLHELLVSERPKLVKLIVLEKAYAELEVIEWTDGDTSNKMTQAEAKAQIETWEKTVFSLQKSVEG DEIGTQLLMNYMYTHYPYVPAEKADVEQALVQAKQAILHDESVDGLAAAILEADLRFTQALLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34780; Mature: 34780
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEKDQDYPFPGNWARLHKMIQEADASGERQRIEPILWDWYQTIPGDPFIFMEIFQCAM CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHH ERPDDPETLEKLQELVGIHVAEAEEPASGGLQIAQYYIMRDQPFEAAHWINQYLEWQDKK CCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC DTVNTQAHQVLQVLKMTEFPAAIAKLKRTLTRGSTGEQIEALQHVHFQIDPVLDNVLHEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVSERPKLVKLIVLEKAYAELEVIEWTDGDTSNKMTQAEAKAQIETWEKTVFSLQKSVEG HHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH DEIGTQLLMNYMYTHYPYVPAEKADVEQALVQAKQAILHDESVDGLAAAILEADLRFTQA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLD HCC >Mature Secondary Structure MEKEKDQDYPFPGNWARLHKMIQEADASGERQRIEPILWDWYQTIPGDPFIFMEIFQCAM CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHH ERPDDPETLEKLQELVGIHVAEAEEPASGGLQIAQYYIMRDQPFEAAHWINQYLEWQDKK CCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC DTVNTQAHQVLQVLKMTEFPAAIAKLKRTLTRGSTGEQIEALQHVHFQIDPVLDNVLHEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVSERPKLVKLIVLEKAYAELEVIEWTDGDTSNKMTQAEAKAQIETWEKTVFSLQKSVEG HHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH DEIGTQLLMNYMYTHYPYVPAEKADVEQALVQAKQAILHDESVDGLAAAILEADLRFTQA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLD HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA