Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is yslB [H]
Identifier: 229918341
GI number: 229918341
Start: 2592648
End: 2593049
Strand: Reverse
Name: yslB [H]
Synonym: EAT1b_2626
Alternate gene names: 229918341
Gene position: 2593049-2592648 (Counterclockwise)
Preceding gene: 229918366
Following gene: 229918338
Centisome position: 86.44
GC content: 49.75
Gene sequence:
>402_bases ATGGAAACGATGAGCCAACCAATTTTCGCGATTGAACTGCTTCGCGACTATGTGTTGACGGATTTGCTTGGCGAAGATTA CGCCCAAGTCATCTATTGGTCAGGAAAACGGGTCGCCCGTAAATTCCCGACGATGTCCGACGATGAACTGACTGCTTTCT TCGCAGAGGCAGGTTGGGGCGAGTTGACAATCAAGAAGGAACGTGGGAGCAAGTTTACTTATGAATTGATCCCACCACCT GCGACTCAGGCCAAAGCGACAGGATACTATCAGCTTGAAGCTGGATTTTTAGCCGAACAGATTGCAGGTCGTTTCCAGTG CGTCGCGGAAGGGTATGCCGATCCAACCCGAAAAGCTGTCCAAATCACCGTCCAACTAGACCGAAAAGACGACTACGAAT AA
Upstream 100 bases:
>100_bases AACCTAGCCGATTTGTGCCACATTCTTTTCAAAAATACAGGATGACCAAATTCCAATTGGTCGTTATAATGATATAGAGA GATTGGAGTGATGGGATAGA
Downstream 100 bases:
>100_bases GAGTCGATGCCAAACGCATCGACTCTTATTTTTGTTTCCGCTGAAGTTGTTGACGCATGTAGCGACGGAATTCATTGAGT TCTTGTCGATGAAACGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues METMSQPIFAIELLRDYVLTDLLGEDYAQVIYWSGKRVARKFPTMSDDELTAFFAEAGWGELTIKKERGSKFTYELIPPP ATQAKATGYYQLEAGFLAEQIAGRFQCVAEGYADPTRKAVQITVQLDRKDDYE
Sequences:
>Translated_133_residues METMSQPIFAIELLRDYVLTDLLGEDYAQVIYWSGKRVARKFPTMSDDELTAFFAEAGWGELTIKKERGSKFTYELIPPP ATQAKATGYYQLEAGFLAEQIAGRFQCVAEGYADPTRKAVQITVQLDRKDDYE >Mature_133_residues METMSQPIFAIELLRDYVLTDLLGEDYAQVIYWSGKRVARKFPTMSDDELTAFFAEAGWGELTIKKERGSKFTYELIPPP ATQAKATGYYQLEAGFLAEQIAGRFQCVAEGYADPTRKAVQITVQLDRKDDYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019642 [H]
Pfam domain/function: PF10702 DUF2507 [H]
EC number: NA
Molecular weight: Translated: 15105; Mature: 15105
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METMSQPIFAIELLRDYVLTDLLGEDYAQVIYWSGKRVARKFPTMSDDELTAFFAEAGWG CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCHHEEEEECCCCC ELTIKKERGSKFTYELIPPPATQAKATGYYQLEAGFLAEQIAGRFQCVAEGYADPTRKAV EEEEECCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEE QITVQLDRKDDYE EEEEEECCCCCCC >Mature Secondary Structure METMSQPIFAIELLRDYVLTDLLGEDYAQVIYWSGKRVARKFPTMSDDELTAFFAEAGWG CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCHHEEEEECCCCC ELTIKKERGSKFTYELIPPPATQAKATGYYQLEAGFLAEQIAGRFQCVAEGYADPTRKAV EEEEECCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEE QITVQLDRKDDYE EEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036830; 8969504; 9384377 [H]