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The map label for this gene is 229918300

Identifier: 229918300

GI number: 229918300

Start: 2545081

End: 2546469

Strand: Reverse

Name: 229918300

Synonym: EAT1b_2583

Alternate gene names: NA

Gene position: 2546469-2545081 (Counterclockwise)

Preceding gene: 229918304

Following gene: 229918299

Centisome position: 84.89

GC content: 35.85

Gene sequence:

>1389_bases
ATGGATTCAAGAATTCTATTCCCTTCTTTACCAAAATGGTTCACTCCACGAGACTATCAATTGGAAGCTATACAAAAGTG
GTCTGAAAACGACTACCGCGGTTTACTAGAGATGGCTACGGGTACTGGAAAAACATTAACCGCTCTCACAGCCATAACAA
AACGGTATGAAGAAACGAATCGGTTAGCAATCATCATTTTATGCCCTTATCAACATTTAGTAGATCAATGGGCGAAAGAT
GCTGAATCCTTTGGGATGAATCCAGTTCTATGCTATGGTTCAAAATCTCAATGGACATCAATTCTATCCGGAAAAATCAC
TCAATATAATTTTAAAATACAAAATTTTATGTGTGTAATCACTACGAATAGCACATTTAAAAATGCTAATTTCCAAGCTC
AACTTAATCGAATTACGGATGGCGGGATGATTGTTGCCGATGAGGCGCATAATTTAGGTACAAAGCAATCGCTTCAATCG
CTTCCTACAGCTTTTAAAAATCGATTAGCACTTAGTGCAACTCCAATACGACACCATGATGGTAGCGGAACCGAACAGTT
ATTAAATTATTTTGGTGGGTCAATATATAAGTTTACTTTGGAAGAAGCGATTAAAAAAGGGTTTTTAACAAAGTATTATT
ACTACCCACACCTAGTCTCCCTCACAGAAGATGAACTGGAAATTTATCATGAGCTTACGAATAAAATTTCAAAATTAGTT
AATCTATCTGACCAACAATCAATTGAATCGACCGGAAGTACTACTGGGCTACTTGAAATGTTGTTAATTAAGCGCGCTCG
ATTAATTAATTCAGCTCAGCAAAAAGATATTTTGTTAAAGAAACAACTGAGTATGCAAGAAACTCTTGACCACACTATAG
TGTATTGCGGAGACCATTCTATAGAGGACCAACGTCATGTAGATCATATTACACAATTTTTAAACGAAGATTTGAACATA
TCAGCGAAAACTTTTACCTCAACTGAATCGAAAGAACTTCGACAGATTCTGTTAAAGGAGTTTTCAGAGAACGCGATTCA
AGCGCTTGTTGCTATCCGATGTCTAGATGAAGGAGTAGATGTTCCTTCTGCTGAGACTGCTTATATTTTGGCTAGCACAA
CCAATCCAAAAGAGTTCATTCAACGTCGTGGACGAATTTTACGTAAACATCCTGGAAAAGAATATGCGTATATTCATGAT
TACATTGTCATTCCACGTCCTTTGACAGAAATTGATTTACTAACTGACAAAGAATTTAATATTGAACGCCGGTTATTAAT
GAATGAGTTAAAAAGGGTAAATGAGTTCGCATCAATATCTGAAAATCATTACCAAGCACTACAAGTTTTAAATCCTATAA
AAGAGGCATTTAATCTAGTCGATCTATAA

Upstream 100 bases:

>100_bases
ACCTTGATAACTTTTTTATTAACTATATTCTTTATTATATCTATAATAAGGGTATATGGTAGGTTTTACCTACTCCTATA
TATGATAAAGGAGCTATTAT

Downstream 100 bases:

>100_bases
CCAATTGAGAGGTGAACATGATGAGTCAAAACCATTCAAACAGCGAAAATGATGTATATGCACTGTTAAGCGAGTTATCC
GAAACAGAACAACAAATTCT

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; DNA Repair Helicase RAD; DNA Repair Protein Rad; Helicase Domain-Containing Protein; DNA Repair Protein RAD; DNA Repair Helicase Rad; DNA-Repair Protein; Type III Restriction Res Subunit Family; DNA Repair Protein; Helicase-Like; Superfamily II DNA/RNA Helicase; DNA-Repair Helicase; DNA/RNA Helicase; Type III Restriction- System Subunit Res; DNA Repair Related Protein; Restriction; XPB/RAD25-Related Helicase; Helicase Domain Protein

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MDSRILFPSLPKWFTPRDYQLEAIQKWSENDYRGLLEMATGTGKTLTALTAITKRYEETNRLAIIILCPYQHLVDQWAKD
AESFGMNPVLCYGSKSQWTSILSGKITQYNFKIQNFMCVITTNSTFKNANFQAQLNRITDGGMIVADEAHNLGTKQSLQS
LPTAFKNRLALSATPIRHHDGSGTEQLLNYFGGSIYKFTLEEAIKKGFLTKYYYYPHLVSLTEDELEIYHELTNKISKLV
NLSDQQSIESTGSTTGLLEMLLIKRARLINSAQQKDILLKKQLSMQETLDHTIVYCGDHSIEDQRHVDHITQFLNEDLNI
SAKTFTSTESKELRQILLKEFSENAIQALVAIRCLDEGVDVPSAETAYILASTTNPKEFIQRRGRILRKHPGKEYAYIHD
YIVIPRPLTEIDLLTDKEFNIERRLLMNELKRVNEFASISENHYQALQVLNPIKEAFNLVDL

Sequences:

>Translated_462_residues
MDSRILFPSLPKWFTPRDYQLEAIQKWSENDYRGLLEMATGTGKTLTALTAITKRYEETNRLAIIILCPYQHLVDQWAKD
AESFGMNPVLCYGSKSQWTSILSGKITQYNFKIQNFMCVITTNSTFKNANFQAQLNRITDGGMIVADEAHNLGTKQSLQS
LPTAFKNRLALSATPIRHHDGSGTEQLLNYFGGSIYKFTLEEAIKKGFLTKYYYYPHLVSLTEDELEIYHELTNKISKLV
NLSDQQSIESTGSTTGLLEMLLIKRARLINSAQQKDILLKKQLSMQETLDHTIVYCGDHSIEDQRHVDHITQFLNEDLNI
SAKTFTSTESKELRQILLKEFSENAIQALVAIRCLDEGVDVPSAETAYILASTTNPKEFIQRRGRILRKHPGKEYAYIHD
YIVIPRPLTEIDLLTDKEFNIERRLLMNELKRVNEFASISENHYQALQVLNPIKEAFNLVDL
>Mature_462_residues
MDSRILFPSLPKWFTPRDYQLEAIQKWSENDYRGLLEMATGTGKTLTALTAITKRYEETNRLAIIILCPYQHLVDQWAKD
AESFGMNPVLCYGSKSQWTSILSGKITQYNFKIQNFMCVITTNSTFKNANFQAQLNRITDGGMIVADEAHNLGTKQSLQS
LPTAFKNRLALSATPIRHHDGSGTEQLLNYFGGSIYKFTLEEAIKKGFLTKYYYYPHLVSLTEDELEIYHELTNKISKLV
NLSDQQSIESTGSTTGLLEMLLIKRARLINSAQQKDILLKKQLSMQETLDHTIVYCGDHSIEDQRHVDHITQFLNEDLNI
SAKTFTSTESKELRQILLKEFSENAIQALVAIRCLDEGVDVPSAETAYILASTTNPKEFIQRRGRILRKHPGKEYAYIHD
YIVIPRPLTEIDLLTDKEFNIERRLLMNELKRVNEFASISENHYQALQVLNPIKEAFNLVDL

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52918; Mature: 52918

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRILFPSLPKWFTPRDYQLEAIQKWSENDYRGLLEMATGTGKTLTALTAITKRYEETN
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RLAIIILCPYQHLVDQWAKDAESFGMNPVLCYGSKSQWTSILSGKITQYNFKIQNFMCVI
CEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCEEEEEEEEEEEEEE
TTNSTFKNANFQAQLNRITDGGMIVADEAHNLGTKQSLQSLPTAFKNRLALSATPIRHHD
EECCCCCCCCHHHHEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC
GSGTEQLLNYFGGSIYKFTLEEAIKKGFLTKYYYYPHLVSLTEDELEIYHELTNKISKLV
CCCHHHHHHHHCCCEEEEHHHHHHHCCCHHEEEECCEEEECCHHHHHHHHHHHHHHHHHH
NLSDQQSIESTGSTTGLLEMLLIKRARLINSAQQKDILLKKQLSMQETLDHTIVYCGDHS
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
IEDQRHVDHITQFLNEDLNISAKTFTSTESKELRQILLKEFSENAIQALVAIRCLDEGVD
CCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPSAETAYILASTTNPKEFIQRRGRILRKHPGKEYAYIHDYIVIPRPLTEIDLLTDKEFN
CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHEEECCCCCC
IERRLLMNELKRVNEFASISENHYQALQVLNPIKEAFNLVDL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSRILFPSLPKWFTPRDYQLEAIQKWSENDYRGLLEMATGTGKTLTALTAITKRYEETN
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RLAIIILCPYQHLVDQWAKDAESFGMNPVLCYGSKSQWTSILSGKITQYNFKIQNFMCVI
CEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCEEEEEEEEEEEEEE
TTNSTFKNANFQAQLNRITDGGMIVADEAHNLGTKQSLQSLPTAFKNRLALSATPIRHHD
EECCCCCCCCHHHHEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC
GSGTEQLLNYFGGSIYKFTLEEAIKKGFLTKYYYYPHLVSLTEDELEIYHELTNKISKLV
CCCHHHHHHHHCCCEEEEHHHHHHHCCCHHEEEECCEEEECCHHHHHHHHHHHHHHHHHH
NLSDQQSIESTGSTTGLLEMLLIKRARLINSAQQKDILLKKQLSMQETLDHTIVYCGDHS
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
IEDQRHVDHITQFLNEDLNISAKTFTSTESKELRQILLKEFSENAIQALVAIRCLDEGVD
CCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPSAETAYILASTTNPKEFIQRRGRILRKHPGKEYAYIHDYIVIPRPLTEIDLLTDKEFN
CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHEEECCCCCC
IERRLLMNELKRVNEFASISENHYQALQVLNPIKEAFNLVDL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA