Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229918174
Identifier: 229918174
GI number: 229918174
Start: 2410804
End: 2411160
Strand: Reverse
Name: 229918174
Synonym: EAT1b_2454
Alternate gene names: NA
Gene position: 2411160-2410804 (Counterclockwise)
Preceding gene: 229918176
Following gene: 229918173
Centisome position: 80.37
GC content: 47.9
Gene sequence:
>357_bases TTGTCGAGTCGCCAACGTCGAGATTGGATTGCTTTCGGCTTTGTTTTAGCATTTTTAGGAGTCGCCACGGTGAAGAAACT GGCGCGAGGAACTGCAAATGATGCCGCTGCTCAACAACATCGAGCATCTACAATCACTACGCTAAAAGAACAATTTGGGA ATGTGGCGAAACATGCATCGCAGGTTGCCGCCGCAGGAAAACTGCAAGGAAAAGAATTGACTGACCAAGTGAAAGCCGAA GTCGAACGCTATCAACAAGACATTCAGCCTTCAGTCGAGCGCATCCAAGGGAACCTTCAGGAACTCTCGAACGTACAGTC TGCTATGACTGACAAAACCGTCAATCAAACACAGTGA
Upstream 100 bases:
>100_bases AAAATTTTATTTGCGATATAGGTTTTTAATCACTCTTTTTTGGTAAAATAATATGAAAAGAATGTAATTCTGATTATCCG AGCTTGAGGAGGGGAATGAA
Downstream 100 bases:
>100_bases GTGTTTGAGGTCATCGTCCGTCGATTACATTTGACTTTTTATCCGGAAAGGATGGATCGAGATGGAACACGAAAAAGAAT TCACTGGCCCTGAGGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSSRQRRDWIAFGFVLAFLGVATVKKLARGTANDAAAQQHRASTITTLKEQFGNVAKHASQVAAAGKLQGKELTDQVKAE VERYQQDIQPSVERIQGNLQELSNVQSAMTDKTVNQTQ
Sequences:
>Translated_118_residues MSSRQRRDWIAFGFVLAFLGVATVKKLARGTANDAAAQQHRASTITTLKEQFGNVAKHASQVAAAGKLQGKELTDQVKAE VERYQQDIQPSVERIQGNLQELSNVQSAMTDKTVNQTQ >Mature_117_residues SSRQRRDWIAFGFVLAFLGVATVKKLARGTANDAAAQQHRASTITTLKEQFGNVAKHASQVAAAGKLQGKELTDQVKAEV ERYQQDIQPSVERIQGNLQELSNVQSAMTDKTVNQTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12957; Mature: 12826
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRQRRDWIAFGFVLAFLGVATVKKLARGTANDAAAQQHRASTITTLKEQFGNVAKHAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVAAAGKLQGKELTDQVKAEVERYQQDIQPSVERIQGNLQELSNVQSAMTDKTVNQTQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSRQRRDWIAFGFVLAFLGVATVKKLARGTANDAAAQQHRASTITTLKEQFGNVAKHAS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVAAAGKLQGKELTDQVKAEVERYQQDIQPSVERIQGNLQELSNVQSAMTDKTVNQTQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA