Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is hpr [H]
Identifier: 229918173
GI number: 229918173
Start: 2410179
End: 2410742
Strand: Reverse
Name: hpr [H]
Synonym: EAT1b_2453
Alternate gene names: 229918173
Gene position: 2410742-2410179 (Counterclockwise)
Preceding gene: 229918174
Following gene: 229918171
Centisome position: 80.36
GC content: 45.04
Gene sequence:
>564_bases ATGGAACACGAAAAAGAATTCACTGGCCCTGAGGCCATGCTCTATAGCCACAAAATCATTCAATTGAGTAAGGCTTTGTG GAAAACCGTCGAAAAAGACTGGCAAAACTGGATCAAACCGTTCGACTTAAATATCAATGAACATCACATCTTATGGATTG CCCACGCTTTAGGCGGTGCATCGATTTCAGAAATCGCAAAATATGGCGTCATGCACGTCTCGACTGCTTTCAACTTCTCG AAGAAGTTAGAAGATCGTGGATTACTTACGTTTTCTAAAAAAGAGACGGACAAACGAAACACGTACGTTCAATTGACACC TGAAGGCGAGTCGTTACTACTCGAAACGATTCATGCATTCGACCCAGAAGGGAACGGCGTATTCCGAGCTTCCCTCCCGC TCCAAGAACTGTATGGAAAGTTCCCTGACTTAACAGATATGACGGCGATCGTACGTCGCTTGTACGGGGATAACTTTATG GATATCTTTGCGGAAACGTCAAAAATGATCACAGAAGAGGCAGGCAGACGCCCTGATGAGGATGAACTCAGTCAAGAAGC CTGA
Upstream 100 bases:
>100_bases TCTGCTATGACTGACAAAACCGTCAATCAAACACAGTGAGTGTTTGAGGTCATCGTCCGTCGATTACATTTGACTTTTTA TCCGGAAAGGATGGATCGAG
Downstream 100 bases:
>100_bases CCTGCCGATAAAGTGGTTCTGTGACGTCTAATGCGATTCCTTGTCGGACGCATGCCTCCAGAATCGTTTTGACGTCAAGT CTCACATCTAACATACCTGC
Product: Hpr family transcriptional regulator
Products: NA
Alternate protein names: Protease production regulatory protein hpr [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MEHEKEFTGPEAMLYSHKIIQLSKALWKTVEKDWQNWIKPFDLNINEHHILWIAHALGGASISEIAKYGVMHVSTAFNFS KKLEDRGLLTFSKKETDKRNTYVQLTPEGESLLLETIHAFDPEGNGVFRASLPLQELYGKFPDLTDMTAIVRRLYGDNFM DIFAETSKMITEEAGRRPDEDELSQEA
Sequences:
>Translated_187_residues MEHEKEFTGPEAMLYSHKIIQLSKALWKTVEKDWQNWIKPFDLNINEHHILWIAHALGGASISEIAKYGVMHVSTAFNFS KKLEDRGLLTFSKKETDKRNTYVQLTPEGESLLLETIHAFDPEGNGVFRASLPLQELYGKFPDLTDMTAIVRRLYGDNFM DIFAETSKMITEEAGRRPDEDELSQEA >Mature_187_residues MEHEKEFTGPEAMLYSHKIIQLSKALWKTVEKDWQNWIKPFDLNINEHHILWIAHALGGASISEIAKYGVMHVSTAFNFS KKLEDRGLLTFSKKETDKRNTYVQLTPEGESLLLETIHAFDPEGNGVFRASLPLQELYGKFPDLTDMTAIVRRLYGDNFM DIFAETSKMITEEAGRRPDEDELSQEA
Specific function: Negative regulator of protease production and sporulation [H]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 21479; Mature: 21479
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHEKEFTGPEAMLYSHKIIQLSKALWKTVEKDWQNWIKPFDLNINEHHILWIAHALGGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCC SISEIAKYGVMHVSTAFNFSKKLEDRGLLTFSKKETDKRNTYVQLTPEGESLLLETIHAF CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHC DPEGNGVFRASLPLQELYGKFPDLTDMTAIVRRLYGDNFMDIFAETSKMITEEAGRRPDE CCCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH DELSQEA HHHCCCC >Mature Secondary Structure MEHEKEFTGPEAMLYSHKIIQLSKALWKTVEKDWQNWIKPFDLNINEHHILWIAHALGGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCC SISEIAKYGVMHVSTAFNFSKKLEDRGLLTFSKKETDKRNTYVQLTPEGESLLLETIHAF CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHC DPEGNGVFRASLPLQELYGKFPDLTDMTAIVRRLYGDNFMDIFAETSKMITEEAGRRPDE CCCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH DELSQEA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA