Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is fhs [H]
Identifier: 229918043
GI number: 229918043
Start: 2274098
End: 2275783
Strand: Reverse
Name: fhs [H]
Synonym: EAT1b_2322
Alternate gene names: 229918043
Gene position: 2275783-2274098 (Counterclockwise)
Preceding gene: 229918068
Following gene: 229918042
Centisome position: 75.86
GC content: 50.42
Gene sequence:
>1686_bases ATGACAACGACGAAACCATTATCTGACCTTACGATTGCCCAACAAGCCAAAACCTTGCCGATTAAAGACATCGCAGCAAA AATCGGATTACACGAAGATGACCTGGATCTTTACGGAAAATACAAAGCGAAACTTTCTTACGATGTCCTCGAACGTGTGA AAACGAAGGAAGACGGAAAACTCGTTCTCGTCACCGCCATCAATCCGACACCAGCTGGCGAAGGAAAATCGACGGTGACG GTCGGGCTCGGACAGGCGTTGAACCAATTGGATAAACAAGCGATCGTCTGTCTGCGCGAACCTTCGCTCGGTCCGACGAT GGGCTTAAAAGGTGGCGCTGCTGGTGGTGGCTTCAGTCAAGTTCTCCCGATGGAAGATATCAACCTTCACTTCACAGGTG ACATGCATGCGATCACATCGGCCCATAATACGATCAGTGCCATGATTGACAATCACTTGCACCAAGGAAACGACCTTGGG ATCGATGTCCGACATATTGTCTGGAAGCGCGTCCTTGACTTAAACGACCGCGCACTTCGTCACGTCACGGTCGGCCTCGG TGGTCCTGCTCACGGAGTCCCTCGTGAGGACGGATTTGATATTACCGTCGCTTCGGAAATCATGGCGATTCTCTGTCTGG CCGATTCATTGGAAGACCTCGAAGAACGCATCAAGCGTATCGTAGTCGCCTATGACCATCAAAAAGAACCAATCACGGCA GAACAAATCGGTGCAGCCGGTGCGGCGACGTTACTGTTGAAGGAAGCCTTTAAACCGAACCTCGTCCAAACGCTTGAACA GACACCAGCACTCGTCCACGGCGGGCCGTTCGCGAACATTGCGCACGGATGCAACTCATTGATTGCAACGAAGACTGCGT TAAAGCTTGGGGAGTATGTGGTGACGGAAGCTGGGTTTGGTGCCGACCTCGGGGCAGAAAAGTTCTGTCATATCAAATCT CGAGTCGGTGATTTGAATCCGGATGCGGTCGTACTCGTTGCAACCGTTCGTGCTCTAAAAATGCACGGTGGCGTTTCAAA AGATCAGCTTCACATCGAGAACGTCGGTGCGGTCGGCGAAGGATTAAAATTACTCGCCAAACACATCGATACGATGAAAA AACTCGGTCTGCCTACGGTCGTCGCATTGAACCGTTTCAATTCAGATACAGAAGAGGAACTTGCAACCGTTCTTGATTGG TGTGCGGCACACGGTATTCGTGCTTCGCTCAGCGAAGTATGGGCAAACGGCGGGCTTGGGGGTCGACAATTGGCCGAAGC AGTCATTGACGCCGTCGAGTCGAACGAAAGTAAACTGACGCCTCTATATGAGTTGACCGATTCAATTGAACAAAAGATTA AAACCATTGCGAGAGAAGTATACGGTGCTACAGACGTCGTGTTCACCGCCAAAGCTCAAAAGCAAATGAAAGATGTACAG GCGAACGGCTGGTCGGACCTTCCCATTTGTATGGCGAAGACACCGTTCTCCCTCTCAGACGACCCTTCAAAATTCGGTTA TCAACAAGGATTCACCATCACCGTTCGCGAATTAAAACCTTCAGTGGGAGCAGGATTCCTCGTCGCCTTAACTGGCAACG TGTTAACGATGCCAGGGTTACCGAAACATCCAGCGGCTCTCAATATGGGAATTGACGAATCTGGAAAAGCAATCGGCCTT TTCTAA
Upstream 100 bases:
>100_bases ATTGAATATGTTTAGCCTTGATTCATATTTTAATCCGAAATTCCCGAATGATTTTTAGAGATTAAAAAGATATCGTTCGA CAAACGGAGGGACTTTTTGA
Downstream 100 bases:
>100_bases TAGGGGGATGACACATGATCGTATCGGAGTTGACGTATCCTGACGGGTATCAAACAGAAGTCATGCACGTTCAGGCAGAG CAATCGATTGGAAAAATATT
Product: Formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MTTTKPLSDLTIAQQAKTLPIKDIAAKIGLHEDDLDLYGKYKAKLSYDVLERVKTKEDGKLVLVTAINPTPAGEGKSTVT VGLGQALNQLDKQAIVCLREPSLGPTMGLKGGAAGGGFSQVLPMEDINLHFTGDMHAITSAHNTISAMIDNHLHQGNDLG IDVRHIVWKRVLDLNDRALRHVTVGLGGPAHGVPREDGFDITVASEIMAILCLADSLEDLEERIKRIVVAYDHQKEPITA EQIGAAGAATLLLKEAFKPNLVQTLEQTPALVHGGPFANIAHGCNSLIATKTALKLGEYVVTEAGFGADLGAEKFCHIKS RVGDLNPDAVVLVATVRALKMHGGVSKDQLHIENVGAVGEGLKLLAKHIDTMKKLGLPTVVALNRFNSDTEEELATVLDW CAAHGIRASLSEVWANGGLGGRQLAEAVIDAVESNESKLTPLYELTDSIEQKIKTIAREVYGATDVVFTAKAQKQMKDVQ ANGWSDLPICMAKTPFSLSDDPSKFGYQQGFTITVRELKPSVGAGFLVALTGNVLTMPGLPKHPAALNMGIDESGKAIGL F
Sequences:
>Translated_561_residues MTTTKPLSDLTIAQQAKTLPIKDIAAKIGLHEDDLDLYGKYKAKLSYDVLERVKTKEDGKLVLVTAINPTPAGEGKSTVT VGLGQALNQLDKQAIVCLREPSLGPTMGLKGGAAGGGFSQVLPMEDINLHFTGDMHAITSAHNTISAMIDNHLHQGNDLG IDVRHIVWKRVLDLNDRALRHVTVGLGGPAHGVPREDGFDITVASEIMAILCLADSLEDLEERIKRIVVAYDHQKEPITA EQIGAAGAATLLLKEAFKPNLVQTLEQTPALVHGGPFANIAHGCNSLIATKTALKLGEYVVTEAGFGADLGAEKFCHIKS RVGDLNPDAVVLVATVRALKMHGGVSKDQLHIENVGAVGEGLKLLAKHIDTMKKLGLPTVVALNRFNSDTEEELATVLDW CAAHGIRASLSEVWANGGLGGRQLAEAVIDAVESNESKLTPLYELTDSIEQKIKTIAREVYGATDVVFTAKAQKQMKDVQ ANGWSDLPICMAKTPFSLSDDPSKFGYQQGFTITVRELKPSVGAGFLVALTGNVLTMPGLPKHPAALNMGIDESGKAIGL F >Mature_560_residues TTTKPLSDLTIAQQAKTLPIKDIAAKIGLHEDDLDLYGKYKAKLSYDVLERVKTKEDGKLVLVTAINPTPAGEGKSTVTV GLGQALNQLDKQAIVCLREPSLGPTMGLKGGAAGGGFSQVLPMEDINLHFTGDMHAITSAHNTISAMIDNHLHQGNDLGI DVRHIVWKRVLDLNDRALRHVTVGLGGPAHGVPREDGFDITVASEIMAILCLADSLEDLEERIKRIVVAYDHQKEPITAE QIGAAGAATLLLKEAFKPNLVQTLEQTPALVHGGPFANIAHGCNSLIATKTALKLGEYVVTEAGFGADLGAEKFCHIKSR VGDLNPDAVVLVATVRALKMHGGVSKDQLHIENVGAVGEGLKLLAKHIDTMKKLGLPTVVALNRFNSDTEEELATVLDWC AAHGIRASLSEVWANGGLGGRQLAEAVIDAVESNESKLTPLYELTDSIEQKIKTIAREVYGATDVVFTAKAQKQMKDVQA NGWSDLPICMAKTPFSLSDDPSKFGYQQGFTITVRELKPSVGAGFLVALTGNVLTMPGLPKHPAALNMGIDESGKAIGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=619, Percent_Identity=45.0726978998384, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI36796743, Length=619, Percent_Identity=45.2342487883683, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI310124614, Length=88, Percent_Identity=40.9090909090909, Blast_Score=75, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17568737, Length=622, Percent_Identity=44.5337620578778, Blast_Score=469, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17568739, Length=622, Percent_Identity=44.5337620578778, Blast_Score=469, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6319558, Length=634, Percent_Identity=41.7981072555205, Blast_Score=453, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=43.1309904153355, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI24645718, Length=620, Percent_Identity=43.2258064516129, Blast_Score=446, Evalue=1e-125, Organism=Drosophila melanogaster, GI17137370, Length=620, Percent_Identity=43.2258064516129, Blast_Score=446, Evalue=1e-125, Organism=Drosophila melanogaster, GI62472483, Length=620, Percent_Identity=43.2258064516129, Blast_Score=445, Evalue=1e-125, Organism=Drosophila melanogaster, GI45551871, Length=620, Percent_Identity=43.2258064516129, Blast_Score=445, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 59844; Mature: 59712
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTKPLSDLTIAQQAKTLPIKDIAAKIGLHEDDLDLYGKYKAKLSYDVLERVKTKEDGK CCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCC LVLVTAINPTPAGEGKSTVTVGLGQALNQLDKQAIVCLREPSLGPTMGLKGGAAGGGFSQ EEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHH VLPMEDINLHFTGDMHAITSAHNTISAMIDNHLHQGNDLGIDVRHIVWKRVLDLNDRALR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEE HVTVGLGGPAHGVPREDGFDITVASEIMAILCLADSLEDLEERIKRIVVAYDHQKEPITA EEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCH EQIGAAGAATLLLKEAFKPNLVQTLEQTPALVHGGPFANIAHGCNSLIATKTALKLGEYV HHHCCCHHHHHHHHHHCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VTEAGFGADLGAEKFCHIKSRVGDLNPDAVVLVATVRALKMHGGVSKDQLHIENVGAVGE EECCCCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCEEECCCCCHHH GLKLLAKHIDTMKKLGLPTVVALNRFNSDTEEELATVLDWCAAHGIRASLSEVWANGGLG HHHHHHHHHHHHHHCCCCCEEEEHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GRQLAEAVIDAVESNESKLTPLYELTDSIEQKIKTIAREVYGATDVVFTAKAQKQMKDVQ HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH ANGWSDLPICMAKTPFSLSDDPSKFGYQQGFTITVRELKPSVGAGFLVALTGNVLTMPGL CCCCCCCCEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCEEECCCC PKHPAALNMGIDESGKAIGLF CCCCCEEECCCCCCCCEECCC >Mature Secondary Structure TTTKPLSDLTIAQQAKTLPIKDIAAKIGLHEDDLDLYGKYKAKLSYDVLERVKTKEDGK CCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCC LVLVTAINPTPAGEGKSTVTVGLGQALNQLDKQAIVCLREPSLGPTMGLKGGAAGGGFSQ EEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHH VLPMEDINLHFTGDMHAITSAHNTISAMIDNHLHQGNDLGIDVRHIVWKRVLDLNDRALR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEE HVTVGLGGPAHGVPREDGFDITVASEIMAILCLADSLEDLEERIKRIVVAYDHQKEPITA EEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCH EQIGAAGAATLLLKEAFKPNLVQTLEQTPALVHGGPFANIAHGCNSLIATKTALKLGEYV HHHCCCHHHHHHHHHHCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VTEAGFGADLGAEKFCHIKSRVGDLNPDAVVLVATVRALKMHGGVSKDQLHIENVGAVGE EECCCCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCEEECCCCCHHH GLKLLAKHIDTMKKLGLPTVVALNRFNSDTEEELATVLDWCAAHGIRASLSEVWANGGLG HHHHHHHHHHHHHHCCCCCEEEEHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GRQLAEAVIDAVESNESKLTPLYELTDSIEQKIKTIAREVYGATDVVFTAKAQKQMKDVQ HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH ANGWSDLPICMAKTPFSLSDDPSKFGYQQGFTITVRELKPSVGAGFLVALTGNVLTMPGL CCCCCCCCEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCEEECCCC PKHPAALNMGIDESGKAIGLF CCCCCEEECCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA