Click here to switch to the map view.

The map label for this gene is 229918042

Identifier: 229918042

GI number: 229918042

Start: 2273175

End: 2274083

Strand: Reverse

Name: 229918042

Synonym: EAT1b_2321

Alternate gene names: NA

Gene position: 2274083-2273175 (Counterclockwise)

Preceding gene: 229918043

Following gene: 229918041

Centisome position: 75.81

GC content: 48.84

Gene sequence:

>909_bases
ATGATCGTATCGGAGTTGACGTATCCTGACGGGTATCAAACAGAAGTCATGCACGTTCAGGCAGAGCAATCGATTGGAAA
AATATTCATGTTTCATGGGATGCTCGAACATCACGAAAGATATATTGAGTTTGCACAGTTTATGGCAGATAATGGCTATG
ACGTATTTGTGTGTGACTTGCGTGGTGCAGGTACAAGCGCTCATGATCAACAGTCTTATGGACACCTTGCTCCTGGCGAT
GGCTTTCAGCAACTTGTCGAGGATGCTCGATATCTAATCGACCGTTACGAGGATGGGCGCCCTACTTATGTGTTAGGTCA
CAGTTTCGGTTCCCTGCTTGCTCGTCGACTCGGTCAAATCATGGGGCATGCCTTGGCTGGATTGATTGTCGTCGCCCCGC
CCCCACATCCTGGGGTCGCAGGTGAAGCGGGGCATCGTTTAATCGCTACCGTCATGAAACGGAAAGGTGCCACCCATCAA
TCACGTTTCTTTGAACGCCTCTTGTTCGGACGTTACAACCTTAAGTTTTTACCTGCTCGAACGGATAGTGACTGGCTCTC
AAGTGTTCCAGACGAAGTCGACTCCTATCTCGCCGACCCAAACTGTGGCGGTCTGCCTTCCCTCGGTTTTTTACATGAAG
TGACACGTGCTTCCTTAGATGTCACCACGGCTGCACGGATTCATGAACATCCGAAGTCCCTTCCAGTTCTGTTCGTTGCC
GGAGTGGACGATCCTGTCACGCATGATGGTGAAGGATTGAACGGAATCATTAAGAAGTATCGAAATGCGGATGTCGAACT
CGCAGTCGTCACATACGACAATGCCCGACATGAAATTCTTCGCGAAGCGCACCGTGAACAAGTGTGGTCAGATATTCTTA
CTTGGATGAAGCAAAATAAAATCCATTAA

Upstream 100 bases:

>100_bases
TGTTAACGATGCCAGGGTTACCGAAACATCCAGCGGCTCTCAATATGGGAATTGACGAATCTGGAAAAGCAATCGGCCTT
TTCTAATAGGGGGATGACAC

Downstream 100 bases:

>100_bases
TTTACTCAATCCCCTTTTACAAGGGGATTTTTCATTTACCTGATTTTAGAAAAATTATTTTAAGCATTTACCTTTTTTGA
AATTCTGCTTCTTCTTTCCA

Product: alpha/beta hydrolase fold protein

Products: glycerophosphocholine; carboxylate

Alternate protein names: Lysophospholipase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase; Lipase; Lysophospholipase Protein; Alpha/Beta Hydrolase Family Protein; Carboxylic Ester Hydrolase; Alpha/Beta Fold Family Protein Hydrolase; Aminopeptidase; Lysophospholipase-Like Protein; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MIVSELTYPDGYQTEVMHVQAEQSIGKIFMFHGMLEHHERYIEFAQFMADNGYDVFVCDLRGAGTSAHDQQSYGHLAPGD
GFQQLVEDARYLIDRYEDGRPTYVLGHSFGSLLARRLGQIMGHALAGLIVVAPPPHPGVAGEAGHRLIATVMKRKGATHQ
SRFFERLLFGRYNLKFLPARTDSDWLSSVPDEVDSYLADPNCGGLPSLGFLHEVTRASLDVTTAARIHEHPKSLPVLFVA
GVDDPVTHDGEGLNGIIKKYRNADVELAVVTYDNARHEILREAHREQVWSDILTWMKQNKIH

Sequences:

>Translated_302_residues
MIVSELTYPDGYQTEVMHVQAEQSIGKIFMFHGMLEHHERYIEFAQFMADNGYDVFVCDLRGAGTSAHDQQSYGHLAPGD
GFQQLVEDARYLIDRYEDGRPTYVLGHSFGSLLARRLGQIMGHALAGLIVVAPPPHPGVAGEAGHRLIATVMKRKGATHQ
SRFFERLLFGRYNLKFLPARTDSDWLSSVPDEVDSYLADPNCGGLPSLGFLHEVTRASLDVTTAARIHEHPKSLPVLFVA
GVDDPVTHDGEGLNGIIKKYRNADVELAVVTYDNARHEILREAHREQVWSDILTWMKQNKIH
>Mature_302_residues
MIVSELTYPDGYQTEVMHVQAEQSIGKIFMFHGMLEHHERYIEFAQFMADNGYDVFVCDLRGAGTSAHDQQSYGHLAPGD
GFQQLVEDARYLIDRYEDGRPTYVLGHSFGSLLARRLGQIMGHALAGLIVVAPPPHPGVAGEAGHRLIATVMKRKGATHQ
SRFFERLLFGRYNLKFLPARTDSDWLSSVPDEVDSYLADPNCGGLPSLGFLHEVTRASLDVTTAARIHEHPKSLPVLFVA
GVDDPVTHDGEGLNGIIKKYRNADVELAVVTYDNARHEILREAHREQVWSDILTWMKQNKIH

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.5

Molecular weight: Translated: 33815; Mature: 33815

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSELTYPDGYQTEVMHVQAEQSIGKIFMFHGMLEHHERYIEFAQFMADNGYDVFVCDL
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
RGAGTSAHDQQSYGHLAPGDGFQQLVEDARYLIDRYEDGRPTYVLGHSFGSLLARRLGQI
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHH
MGHALAGLIVVAPPPHPGVAGEAGHRLIATVMKRKGATHQSRFFERLLFGRYNLKFLPAR
HHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECC
TDSDWLSSVPDEVDSYLADPNCGGLPSLGFLHEVTRASLDVTTAARIHEHPKSLPVLFVA
CCCHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
GVDDPVTHDGEGLNGIIKKYRNADVELAVVTYDNARHEILREAHREQVWSDILTWMKQNK
CCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
IH
CC
>Mature Secondary Structure
MIVSELTYPDGYQTEVMHVQAEQSIGKIFMFHGMLEHHERYIEFAQFMADNGYDVFVCDL
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
RGAGTSAHDQQSYGHLAPGDGFQQLVEDARYLIDRYEDGRPTYVLGHSFGSLLARRLGQI
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHH
MGHALAGLIVVAPPPHPGVAGEAGHRLIATVMKRKGATHQSRFFERLLFGRYNLKFLPAR
HHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECC
TDSDWLSSVPDEVDSYLADPNCGGLPSLGFLHEVTRASLDVTTAARIHEHPKSLPVLFVA
CCCHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
GVDDPVTHDGEGLNGIIKKYRNADVELAVVTYDNARHEILREAHREQVWSDILTWMKQNK
CCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
IH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-lysophosphatidylcholine; H2O

Specific reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA