Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is kch [C]
Identifier: 229918019
GI number: 229918019
Start: 2253513
End: 2253878
Strand: Reverse
Name: kch [C]
Synonym: EAT1b_2298
Alternate gene names: 229918019
Gene position: 2253878-2253513 (Counterclockwise)
Preceding gene: 229918021
Following gene: 229918016
Centisome position: 75.13
GC content: 48.91
Gene sequence:
>366_bases ATGTTGCCGTTCTTACTGACGTTGCGCCGGATTGTCCGCGGAATCTGGCGTGGTCTCCGTGATCCTGAGTTCCAAGTCTT ATTCAGTCTTGCCTTCCTTACCGTCCTCTCCGGTACACTTTTTTACACCCGATTCGAGGCGATGCGTTGGTTGGACGCAC TTTACTTCAGCGTCATCACCCTGACCACCATCGGATACGGTGATTTTGCACCGCAGACCGACATCGGAAAAATATTCACC ATCGGATATGTATTGACCGGGGTCGGCATCATGGTCGGATTTATCACAAAAGTATTTGACCATTTACAAAAAGCACGACT CGATGAATTGGAAGCGAAACAAAAGACGCCACCCTCTGATTCATGA
Upstream 100 bases:
>100_bases TGACTTTCCCCATCCAACTCACCCTTTCTCTTTTTTCGAACTATAGAGGATGTTCCCCTGTCGTTAGCGAACAAACCTAA TATCGAAAGGAGCGAGTGAC
Downstream 100 bases:
>100_bases GGATGGCGTCCTTACGATTAGGAAACTTTCCGATTTTCAATTTCAAGCTGTTGGTTGAAACGCTTCGTCTCGGCGATGAC AACACCCGATAAGAACAAGA
Product: Ion transport 2 domain protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: Ion Transport 2 Domain Protein; Ion Channel Family; Ion Transport 2 Domain-Containing Protein
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLPFLLTLRRIVRGIWRGLRDPEFQVLFSLAFLTVLSGTLFYTRFEAMRWLDALYFSVITLTTIGYGDFAPQTDIGKIFT IGYVLTGVGIMVGFITKVFDHLQKARLDELEAKQKTPPSDS
Sequences:
>Translated_121_residues MLPFLLTLRRIVRGIWRGLRDPEFQVLFSLAFLTVLSGTLFYTRFEAMRWLDALYFSVITLTTIGYGDFAPQTDIGKIFT IGYVLTGVGIMVGFITKVFDHLQKARLDELEAKQKTPPSDS >Mature_121_residues MLPFLLTLRRIVRGIWRGLRDPEFQVLFSLAFLTVLSGTLFYTRFEAMRWLDALYFSVITLTTIGYGDFAPQTDIGKIFT IGYVLTGVGIMVGFITKVFDHLQKARLDELEAKQKTPPSDS
Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13784; Mature: 13784
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFLLTLRRIVRGIWRGLRDPEFQVLFSLAFLTVLSGTLFYTRFEAMRWLDALYFSVIT CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTIGYGDFAPQTDIGKIFTIGYVLTGVGIMVGFITKVFDHLQKARLDELEAKQKTPPSD HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC S C >Mature Secondary Structure MLPFLLTLRRIVRGIWRGLRDPEFQVLFSLAFLTVLSGTLFYTRFEAMRWLDALYFSVIT CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTIGYGDFAPQTDIGKIFTIGYVLTGVGIMVGFITKVFDHLQKARLDELEAKQKTPPSD HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA