Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is proI [H]
Identifier: 229918016
GI number: 229918016
Start: 2250763
End: 2251554
Strand: Reverse
Name: proI [H]
Synonym: EAT1b_2295
Alternate gene names: 229918016
Gene position: 2251554-2250763 (Counterclockwise)
Preceding gene: 229918019
Following gene: 229918010
Centisome position: 75.05
GC content: 54.04
Gene sequence:
>792_bases ATGATGAATCAACTACTAATGGTCGGTGCAGGATCGATGAGCGAGGCACTCGTTCGCGGGTGGATCGACTCGGGCATCGA ACCGACACACATCACAATGACAAACCGAAGTGACCGGGAGCGCTTGCTCTTCCTACAAGATGAACTCGGCGTTCAAATTG TCGAGGACGAAAACGTGAACGACTATGACATCGTCGTATTAGCGATGCAACCAGATGGCGTCATGCCGTATGTAGAATCG AAAGAATGGAAGACACCGTTACTCGTCTCGGTCGCGGCACATATCGAACCGAGCCAGTTAGAAGAGGCTTCAGGGTTACC AGCCGTATGTGCCATGCCGAACACGCCTGTCGCCTATCGGAGCGGGATGACGGGTCTATGGTTCGGTCCAGAAACTGATG AGGCTGATCGCGCAAAAGCGACTTCTCTCTTTGAACGGGTCGGACGAACGGCCGTCACCGATGCAAAGACGATGTCGGCC TTTATGGCTGCTGCTGGGTGCAGCCCGGCCTTCTTCTATGAAATCGTGGGTGCGATGACGCCTGTCCTAACGGATGTCGG TTACGATGAACAGACAGCGCGTCAAATTGTCGCTCAAGCGATGAAAGGCTCCGCTGAGTTGTTGTCTCATGAAACACGGA AGACGAATGAACTGATTGCAGACGTGGCCGCTCCAGGCGGACCGACAGACCGAGGCGTCGGCGTGCTTCGGGAACGGAAC CTTGCTGACGTGATGGCTTCAGCCTTGCGTGAAAGTGCCAAAGAAGATCATGAAACGATCGAGAAACCATAA
Upstream 100 bases:
>100_bases TCCATCTCCTTACAAATGAGCAAGATGGGCGATATTCGAGTTCATGTTTGTTATGATAGTCAACATAACTATTGACCGAA TCGAAAAGAAGAGGTGACGA
Downstream 100 bases:
>100_bases AAAATGGATGGAAGCGACTCGCTTCCATCCATTTTTTCAATTGATCGTATGTATGATGGACACAATCAAACCCACCACTA AAATCCCCGGTAATAAATTG
Product: Pyrroline-5-carboxylate reductase
Products: NA
Alternate protein names: P5C reductase 2; P5CR 2 [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MMNQLLMVGAGSMSEALVRGWIDSGIEPTHITMTNRSDRERLLFLQDELGVQIVEDENVNDYDIVVLAMQPDGVMPYVES KEWKTPLLVSVAAHIEPSQLEEASGLPAVCAMPNTPVAYRSGMTGLWFGPETDEADRAKATSLFERVGRTAVTDAKTMSA FMAAAGCSPAFFYEIVGAMTPVLTDVGYDEQTARQIVAQAMKGSAELLSHETRKTNELIADVAAPGGPTDRGVGVLRERN LADVMASALRESAKEDHETIEKP
Sequences:
>Translated_263_residues MMNQLLMVGAGSMSEALVRGWIDSGIEPTHITMTNRSDRERLLFLQDELGVQIVEDENVNDYDIVVLAMQPDGVMPYVES KEWKTPLLVSVAAHIEPSQLEEASGLPAVCAMPNTPVAYRSGMTGLWFGPETDEADRAKATSLFERVGRTAVTDAKTMSA FMAAAGCSPAFFYEIVGAMTPVLTDVGYDEQTARQIVAQAMKGSAELLSHETRKTNELIADVAAPGGPTDRGVGVLRERN LADVMASALRESAKEDHETIEKP >Mature_263_residues MMNQLLMVGAGSMSEALVRGWIDSGIEPTHITMTNRSDRERLLFLQDELGVQIVEDENVNDYDIVVLAMQPDGVMPYVES KEWKTPLLVSVAAHIEPSQLEEASGLPAVCAMPNTPVAYRSGMTGLWFGPETDEADRAKATSLFERVGRTAVTDAKTMSA FMAAAGCSPAFFYEIVGAMTPVLTDVGYDEQTARQIVAQAMKGSAELLSHETRKTNELIADVAAPGGPTDRGVGVLRERN LADVMASALRESAKEDHETIEKP
Specific function: Proline biosynthesis; third (last) step. [C]
COG id: COG0345
COG function: function code E; Pyrroline-5-carboxylate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrroline-5-carboxylate reductase family [H]
Homologues:
Organism=Homo sapiens, GI24797097, Length=264, Percent_Identity=24.6212121212121, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI24797095, Length=264, Percent_Identity=24.6212121212121, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI198041662, Length=265, Percent_Identity=28.6792452830189, Blast_Score=75, Evalue=9e-14, Organism=Escherichia coli, GI1786585, Length=270, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17569021, Length=266, Percent_Identity=25.9398496240602, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24648116, Length=272, Percent_Identity=26.4705882352941, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR000304 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: =1.5.1.2 [H]
Molecular weight: Translated: 28492; Mature: 28492
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNQLLMVGAGSMSEALVRGWIDSGIEPTHITMTNRSDRERLLFLQDELGVQIVEDENVN CCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHEEEEECCCCEEEEECCCCC DYDIVVLAMQPDGVMPYVESKEWKTPLLVSVAAHIEPSQLEEASGLPAVCAMPNTPVAYR CEEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHCCCCEEEECCCCCHHHH SGMTGLWFGPETDEADRAKATSLFERVGRTAVTDAKTMSAFMAAAGCSPAFFYEIVGAMT CCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PVLTDVGYDEQTARQIVAQAMKGSAELLSHETRKTNELIADVAAPGGPTDRGVGVLRERN HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC LADVMASALRESAKEDHETIEKP HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMNQLLMVGAGSMSEALVRGWIDSGIEPTHITMTNRSDRERLLFLQDELGVQIVEDENVN CCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHEEEEECCCCEEEEECCCCC DYDIVVLAMQPDGVMPYVESKEWKTPLLVSVAAHIEPSQLEEASGLPAVCAMPNTPVAYR CEEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHCCCCEEEECCCCCHHHH SGMTGLWFGPETDEADRAKATSLFERVGRTAVTDAKTMSAFMAAAGCSPAFFYEIVGAMT CCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PVLTDVGYDEQTARQIVAQAMKGSAELLSHETRKTNELIADVAAPGGPTDRGVGVLRERN HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC LADVMASALRESAKEDHETIEKP HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 11418582 [H]