Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is ytoA [H]
Identifier: 229917991
GI number: 229917991
Start: 2223171
End: 2223698
Strand: Reverse
Name: ytoA [H]
Synonym: EAT1b_2270
Alternate gene names: 229917991
Gene position: 2223698-2223171 (Counterclockwise)
Preceding gene: 229917995
Following gene: 229917990
Centisome position: 74.13
GC content: 49.43
Gene sequence:
>528_bases ATGCAATACAAATTAGGAGAGTTGACACCAAAAGTCGATCCGACGACTTATCTCGCACCAGGGGCACATGTGATCGGAGA TGTGACCATCGGCGCGCACTCGGGAGTATGGTTCAATACCGTCATCCGTGGAGACGAAGGACCCATTCGAATCGGTTCTT ACGTCAACATTCAAGATGGTTCGATGATCCACCAATATGAAGGCTCACCGACCATCATCCATGATCGTGTCTCGATTGGT CATATGGCGATGATTCACGGCTGTGAGATTGAAGAAGACTGCTTGATTGGCATGCACGCCACCGTGCTCGATGGGGCGAA GATTGGAAAAGGGTCCTTTGTTGCTGCCGGTGCGCTCGTCACACCAAACATGCAGATTCCTGAAGGGGTGATGGTCATGG GCGTCCCAGCCAAAGTCGTTCGTCCATTAAACGATGAAGACCGTTTTATCATGGAGAGAACGGTCAAGAAATATGCTAAG CGTGCCGAACAATATAAAGAGACGTGCATTCCAATTCGCGAATCATAA
Upstream 100 bases:
>100_bases ACGTATTTTAACTATCTTACCAAGAATATTCTTTTCGTTGCAATTTCTTTTTCGAGTTGTGCGACAATGATAACATATCT TTCTGAAAGGGGTTACAACG
Downstream 100 bases:
>100_bases TGTTTGTGAAAGCGTTTACAAGATTCATAAAATGTTAACGTTTCTCTCGAATTTTCTACATAGTTCCTTTGTATACTGAA GTTGTAGCCAAGCTGATGTA
Product: hexapaptide repeat-containing transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MQYKLGELTPKVDPTTYLAPGAHVIGDVTIGAHSGVWFNTVIRGDEGPIRIGSYVNIQDGSMIHQYEGSPTIIHDRVSIG HMAMIHGCEIEEDCLIGMHATVLDGAKIGKGSFVAAGALVTPNMQIPEGVMVMGVPAKVVRPLNDEDRFIMERTVKKYAK RAEQYKETCIPIRES
Sequences:
>Translated_175_residues MQYKLGELTPKVDPTTYLAPGAHVIGDVTIGAHSGVWFNTVIRGDEGPIRIGSYVNIQDGSMIHQYEGSPTIIHDRVSIG HMAMIHGCEIEEDCLIGMHATVLDGAKIGKGSFVAAGALVTPNMQIPEGVMVMGVPAKVVRPLNDEDRFIMERTVKKYAK RAEQYKETCIPIRES >Mature_175_residues MQYKLGELTPKVDPTTYLAPGAHVIGDVTIGAHSGVWFNTVIRGDEGPIRIGSYVNIQDGSMIHQYEGSPTIIHDRVSIG HMAMIHGCEIEEDCLIGMHATVLDGAKIGKGSFVAAGALVTPNMQIPEGVMVMGVPAKVVRPLNDEDRFIMERTVKKYAK RAEQYKETCIPIRES
Specific function: Unknown
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI87082240, Length=168, Percent_Identity=35.1190476190476, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1787667, Length=175, Percent_Identity=34.8571428571429, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI87081681, Length=158, Percent_Identity=37.9746835443038, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19104; Mature: 19104
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYKLGELTPKVDPTTYLAPGAHVIGDVTIGAHSGVWFNTVIRGDEGPIRIGSYVNIQDG CCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCEEECCEEEECCC SMIHQYEGSPTIIHDRVSIGHMAMIHGCEIEEDCLIGMHATVLDGAKIGKGSFVAAGALV CEEEEECCCCCEEECCCCCCEEEEEECCCCCCCEEEECEEEEECCCCCCCCCEEEECEEE TPNMQIPEGVMVMGVPAKVVRPLNDEDRFIMERTVKKYAKRAEQYKETCIPIRES CCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQYKLGELTPKVDPTTYLAPGAHVIGDVTIGAHSGVWFNTVIRGDEGPIRIGSYVNIQDG CCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCEEECCEEEECCC SMIHQYEGSPTIIHDRVSIGHMAMIHGCEIEEDCLIGMHATVLDGAKIGKGSFVAAGALV CEEEEECCCCCEEECCCCCCEEEEEECCCCCCCEEEECEEEEECCCCCCCCCEEEECEEE TPNMQIPEGVMVMGVPAKVVRPLNDEDRFIMERTVKKYAKRAEQYKETCIPIRES CCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]