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The map label for this gene is pqqE [H]

Identifier: 229917969

GI number: 229917969

Start: 2202269

End: 2203351

Strand: Reverse

Name: pqqE [H]

Synonym: EAT1b_2248

Alternate gene names: 229917969

Gene position: 2203351-2202269 (Counterclockwise)

Preceding gene: 229917970

Following gene: 229917968

Centisome position: 73.45

GC content: 53.19

Gene sequence:

>1083_bases
ATGAAACACATCGACTATAACGAAAATCCGTTCATCGTCATTTGGGAAGTCACACGGGCCTGTGCGCTCTCCTGCGTCCA
CTGCCGGGCAGAGGCACAATTTCACCGTTACGAAAACGAACTCGATACGGAAGAGGGAAAGGCATTGATTCGCGAGATTC
ATGCGATGGATAACCCGATTCTCGTCTTTACGGGCGGTGATCCTCTCATGCGTGAAGATTTATTTGAATTGACCGCATAC
GCCTCTTCCCTCGGGATGCGCGTCTCGATGACACCTTCCGCCACACCTCGAGTGACTCACGATGCCGTGAAACGAGCGAA
AGCGGCTGGTTTGTCACGTTGGGCCTTCTCCATTGACGGACCGGACGCCGTGACGCATGACTATTTCCGCGGCACACGTG
GCAGTTTCGACCGTACCATTCGAGGAATCTCATATTTCCGAGAGGAGGGAATGTCATTTCAAATTAATACGACGGTGACC
GAATACAACGTTGACCGATTACCGGAAATGGCGAAACTCGTAGAATCCCTCGGCGTATCCGTCTGGACGCTCTTTTTCCT
CGTGCCGACTGGACGTGGATCCCTGTTACAACCCATTACACCAGAGCGACATGAGGAAGTATTGAAATGGGCGTTCTCCC
TACAAGAGACGGCACCCTTCATCATCTCGACGACGGAAGCCCAATTTTATCGGAGAGTCGCCCGACAAGAAAATCAGCGC
CGCCGGGCAGCAGGGCTTCCTCCAATCGGACATCCCCATGACGATTTGGCGAAGGCACCTCGCGGAACGAATGACGGGAA
CGGATTCGTCTTTATCTCACATACAGGGGACGTACAGCCGTCCGGTTTTTTACCGATCACCTGCGGAAACGTCCGAACGA
CACCTCTCGCTGATATTTATCGTCACCATCCGACGTTCAAGGCGCTGCGTGATCCCGACACTCATCACGGAAAGTGTGGG
TATTGTGAGTATCGGTATCTATGTGGTGGTTCGCGGGCTAGAGCCTATGCGGTCACTGGCGATTATAAGGAGGCGGAACC
GTACTGCATCTATCAGCCGGAACGTCCCCTCGTTTCACAATAA

Upstream 100 bases:

>100_bases
AGGCGTGTGGTGCCATACTTCATGGAGTCGGATTACCTGACTGCGTCGATTCTGCCAAACGGGCGGTCGATCACTTACAT
CTTCGACAGGCGGTGACGGT

Downstream 100 bases:

>100_bases
CGATTCCCATTTATTCCCTCTCCGTGTAAGATTGAATTATATGATGAGAAGGGAGCCACGTAGGTGCAGTCATTACCGAT
TGACGGATTGTTCTATATTG

Product: Radical SAM domain protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKHIDYNENPFIVIWEVTRACALSCVHCRAEAQFHRYENELDTEEGKALIREIHAMDNPILVFTGGDPLMREDLFELTAY
ASSLGMRVSMTPSATPRVTHDAVKRAKAAGLSRWAFSIDGPDAVTHDYFRGTRGSFDRTIRGISYFREEGMSFQINTTVT
EYNVDRLPEMAKLVESLGVSVWTLFFLVPTGRGSLLQPITPERHEEVLKWAFSLQETAPFIISTTEAQFYRRVARQENQR
RRAAGLPPIGHPHDDLAKAPRGTNDGNGFVFISHTGDVQPSGFLPITCGNVRTTPLADIYRHHPTFKALRDPDTHHGKCG
YCEYRYLCGGSRARAYAVTGDYKEAEPYCIYQPERPLVSQ

Sequences:

>Translated_360_residues
MKHIDYNENPFIVIWEVTRACALSCVHCRAEAQFHRYENELDTEEGKALIREIHAMDNPILVFTGGDPLMREDLFELTAY
ASSLGMRVSMTPSATPRVTHDAVKRAKAAGLSRWAFSIDGPDAVTHDYFRGTRGSFDRTIRGISYFREEGMSFQINTTVT
EYNVDRLPEMAKLVESLGVSVWTLFFLVPTGRGSLLQPITPERHEEVLKWAFSLQETAPFIISTTEAQFYRRVARQENQR
RRAAGLPPIGHPHDDLAKAPRGTNDGNGFVFISHTGDVQPSGFLPITCGNVRTTPLADIYRHHPTFKALRDPDTHHGKCG
YCEYRYLCGGSRARAYAVTGDYKEAEPYCIYQPERPLVSQ
>Mature_360_residues
MKHIDYNENPFIVIWEVTRACALSCVHCRAEAQFHRYENELDTEEGKALIREIHAMDNPILVFTGGDPLMREDLFELTAY
ASSLGMRVSMTPSATPRVTHDAVKRAKAAGLSRWAFSIDGPDAVTHDYFRGTRGSFDRTIRGISYFREEGMSFQINTTVT
EYNVDRLPEMAKLVESLGVSVWTLFFLVPTGRGSLLQPITPERHEEVLKWAFSLQETAPFIISTTEAQFYRRVARQENQR
RRAAGLPPIGHPHDDLAKAPRGTNDGNGFVFISHTGDVQPSGFLPITCGNVRTTPLADIYRHHPTFKALRDPDTHHGKCG
YCEYRYLCGGSRARAYAVTGDYKEAEPYCIYQPERPLVSQ

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40665; Mature: 40665

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIDYNENPFIVIWEVTRACALSCVHCRAEAQFHRYENELDTEEGKALIREIHAMDNPI
CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCE
LVFTGGDPLMREDLFELTAYASSLGMRVSMTPSATPRVTHDAVKRAKAAGLSRWAFSIDG
EEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCC
PDAVTHDYFRGTRGSFDRTIRGISYFREEGMSFQINTTVTEYNVDRLPEMAKLVESLGVS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHCHH
VWTLFFLVPTGRGSLLQPITPERHEEVLKWAFSLQETAPFIISTTEAQFYRRVARQENQR
HEEHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
RRAAGLPPIGHPHDDLAKAPRGTNDGNGFVFISHTGDVQPSGFLPITCGNVRTTPLADIY
HHHCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHH
RHHPTFKALRDPDTHHGKCGYCEYRYLCGGSRARAYAVTGDYKEAEPYCIYQPERPLVSQ
HCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKHIDYNENPFIVIWEVTRACALSCVHCRAEAQFHRYENELDTEEGKALIREIHAMDNPI
CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCE
LVFTGGDPLMREDLFELTAYASSLGMRVSMTPSATPRVTHDAVKRAKAAGLSRWAFSIDG
EEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCC
PDAVTHDYFRGTRGSFDRTIRGISYFREEGMSFQINTTVTEYNVDRLPEMAKLVESLGVS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHCHH
VWTLFFLVPTGRGSLLQPITPERHEEVLKWAFSLQETAPFIISTTEAQFYRRVARQENQR
HEEHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
RRAAGLPPIGHPHDDLAKAPRGTNDGNGFVFISHTGDVQPSGFLPITCGNVRTTPLADIY
HHHCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHH
RHHPTFKALRDPDTHHGKCGYCEYRYLCGGSRARAYAVTGDYKEAEPYCIYQPERPLVSQ
HCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA