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The map label for this gene is lytT [H]

Identifier: 229917856

GI number: 229917856

Start: 2083380

End: 2084360

Strand: Reverse

Name: lytT [H]

Synonym: EAT1b_2134

Alternate gene names: 229917856

Gene position: 2084360-2083380 (Counterclockwise)

Preceding gene: 229917860

Following gene: 229917855

Centisome position: 69.48

GC content: 48.42

Gene sequence:

>981_bases
GTGCTTACTTTCCAAAACGTCTCGATTCGCCAACAAGACACACTCATTCTCGAAAACATTTCATTTACGATCCAACCAGG
TGAGTTGGCCGCCATTCATTGTGGCGTGATTTCTCGGGAAATCATCTTCGGTCTCATCAGTCAGGAAATCAAGACTTATA
CCGGGAACATCGACCACGCTTCAACACTGTCCCTCTTCTCTATCCGGGACGGTTTATACGACCGACTCACCATCGAGGAG
TATTTACGCTTTACCAAGCGCCTATATGATTCAGCTGACTCGGTCGACTCGGTGATGCAGCAACTCCAACTCACAACTTA
CCGCAAGCAACGCCTCCACCGTCTCAATCGTTCCCTTGTCAGACGCACACAGTACGCCGCGCTGCTTCTCCAGGACCGTG
ACCTGTATGTGTTTGAAGAACCTGACCAAGACGTGGACCAAGAGACACGCCACCTTCTACGCGATACGTTACAGACATTG
ACATCGAGACAAAAAGCCGTCCTCGTGTTGACGAGCAACATAGAGAGTGCGCTCTTCATGACATCGACCGTTTATCGGAT
CGACCATCGTCACTTGCGCTTGTTAGATGTGGAACCGGAAGAAGCGGATGAGACAGACATCTCATCTGAGGTCATCCATG
TCCGTTTCGAGAAAATCCCGACGAAAGTGAATGAAAAAATCATTTTACTCGATCCTCCTGAAATCGACTTCATCGAAAGT
CAGGACGGACAGTCGATTTTACATAGTCAATCGGATCAGTTCCCGAGCGTCTTCACGATGAACGAGCTCGAAACGCGTTT
GACTCCGTACGGTTTCTTCCGCTGCCATCGGTCCTATCTCGTGAACTTACAACGTGTCCGCGAAGTCATCACCTATACGA
AAAATAGCTTCAGTCTCGTCTTGGATGATCCAGAGAAGACAACGATTCCGTTATCTAAGACAAAAATGGCAGAATTGAAG
ACGATGATGGGGCTCAAATAG

Upstream 100 bases:

>100_bases
CTTCCATGTTACCAAAAGATGTAACTTCCATGTGTAATCATCTTCCTCTTAAGCCCTTCTCTGTAAAATGTTATACTCCA
ACTAAAAAGGGAGGGATTCG

Downstream 100 bases:

>100_bases
TCTCCATTCACAGTTCTATTCGCTTCGTTCACGTCATGATAAGCGCCATTTATCGCCATTTGAGTGCGGCCTTTCCCCAT
TCCTTATACGATAGAGGCAA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLTFQNVSIRQQDTLILENISFTIQPGELAAIHCGVISREIIFGLISQEIKTYTGNIDHASTLSLFSIRDGLYDRLTIEE
YLRFTKRLYDSADSVDSVMQQLQLTTYRKQRLHRLNRSLVRRTQYAALLLQDRDLYVFEEPDQDVDQETRHLLRDTLQTL
TSRQKAVLVLTSNIESALFMTSTVYRIDHRHLRLLDVEPEEADETDISSEVIHVRFEKIPTKVNEKIILLDPPEIDFIES
QDGQSILHSQSDQFPSVFTMNELETRLTPYGFFRCHRSYLVNLQRVREVITYTKNSFSLVLDDPEKTTIPLSKTKMAELK
TMMGLK

Sequences:

>Translated_326_residues
MLTFQNVSIRQQDTLILENISFTIQPGELAAIHCGVISREIIFGLISQEIKTYTGNIDHASTLSLFSIRDGLYDRLTIEE
YLRFTKRLYDSADSVDSVMQQLQLTTYRKQRLHRLNRSLVRRTQYAALLLQDRDLYVFEEPDQDVDQETRHLLRDTLQTL
TSRQKAVLVLTSNIESALFMTSTVYRIDHRHLRLLDVEPEEADETDISSEVIHVRFEKIPTKVNEKIILLDPPEIDFIES
QDGQSILHSQSDQFPSVFTMNELETRLTPYGFFRCHRSYLVNLQRVREVITYTKNSFSLVLDDPEKTTIPLSKTKMAELK
TMMGLK
>Mature_326_residues
MLTFQNVSIRQQDTLILENISFTIQPGELAAIHCGVISREIIFGLISQEIKTYTGNIDHASTLSLFSIRDGLYDRLTIEE
YLRFTKRLYDSADSVDSVMQQLQLTTYRKQRLHRLNRSLVRRTQYAALLLQDRDLYVFEEPDQDVDQETRHLLRDTLQTL
TSRQKAVLVLTSNIESALFMTSTVYRIDHRHLRLLDVEPEEADETDISSEVIHVRFEKIPTKVNEKIILLDPPEIDFIES
QDGQSILHSQSDQFPSVFTMNELETRLTPYGFFRCHRSYLVNLQRVREVITYTKNSFSLVLDDPEKTTIPLSKTKMAELK
TMMGLK

Specific function: Member of the two-component regulatory system lytS/lytT that probably regulates genes involved in cell wall metabolism [H]

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788724, Length=102, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 37939; Mature: 37939

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50930 HTH_LYTTR ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFQNVSIRQQDTLILENISFTIQPGELAAIHCGVISREIIFGLISQEIKTYTGNIDHA
CCEECCCCCCCCCEEEEECCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC
STLSLFSIRDGLYDRLTIEEYLRFTKRLYDSADSVDSVMQQLQLTTYRKQRLHRLNRSLV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTQYAALLLQDRDLYVFEEPDQDVDQETRHLLRDTLQTLTSRQKAVLVLTSNIESALFM
HHHHHHHEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
TSTVYRIDHRHLRLLDVEPEEADETDISSEVIHVRFEKIPTKVNEKIILLDPPEIDFIES
HHHHHEECCCEEEEEECCCCCCCCCCCCHHHEEEEHHHCCCCCCCEEEEECCCCCCEEEC
QDGQSILHSQSDQFPSVFTMNELETRLTPYGFFRCHRSYLVNLQRVREVITYTKNSFSLV
CCCHHHHHCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LDDPEKTTIPLSKTKMAELKTMMGLK
EECCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTFQNVSIRQQDTLILENISFTIQPGELAAIHCGVISREIIFGLISQEIKTYTGNIDHA
CCEECCCCCCCCCEEEEECCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC
STLSLFSIRDGLYDRLTIEEYLRFTKRLYDSADSVDSVMQQLQLTTYRKQRLHRLNRSLV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTQYAALLLQDRDLYVFEEPDQDVDQETRHLLRDTLQTLTSRQKAVLVLTSNIESALFM
HHHHHHHEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
TSTVYRIDHRHLRLLDVEPEEADETDISSEVIHVRFEKIPTKVNEKIILLDPPEIDFIES
HHHHHEECCCEEEEEECCCCCCCCCCCCHHHEEEEHHHCCCCCCCEEEEECCCCCCEEEC
QDGQSILHSQSDQFPSVFTMNELETRLTPYGFFRCHRSYLVNLQRVREVITYTKNSFSLV
CCCHHHHHCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LDDPEKTTIPLSKTKMAELKTMMGLK
EECCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]