Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229917805
Identifier: 229917805
GI number: 229917805
Start: 2038995
End: 2039777
Strand: Reverse
Name: 229917805
Synonym: EAT1b_2083
Alternate gene names: NA
Gene position: 2039777-2038995 (Counterclockwise)
Preceding gene: 229917811
Following gene: 229917793
Centisome position: 67.99
GC content: 51.98
Gene sequence:
>783_bases ATGTCCAAATGGGGAAATCGATTCAAGAAATGGTTCTTTTCGGAGATCGAAGCCGAGATCACGTTTGACCCGGCAGCACT CATTCCGAAGCAGACCGTGACGGGTACGTTGCACGTCTCCAACCCGACAACGAATGTCGTTCGATTACAGGAACTCACCC TGACCTTCTTGACGACGTTCAAAGACATCACCATGGAAGGAAACGAGTTCAATCGAGAAGCTGATATTCAAGAAGTCCCG ATTCCACTATCGCTTGTATTAGAGCCTGGAGCGAAAGAGGACGTTCCGTTTTCATTCGAGTTGACGATGTACGCACCCTC TTCTGCCGGCGCCCCGTATAGTATAGAGGCTACATTGTGGGACAAGGACATCAAACGAGTTTGGTTTGATGTAATCGAAC ACATCGAAATCGAACCGATGCCTGAACTGAAACGATTACTCGATGCGACCGCTCACGCTGGACTTGAGCCGATGTTCGTC CGAAACGTAATCGACCCGCTCGGGGAAGAACGTCCGTATCCATTCGTTGAAAAGTATGGATTCAAGCCGGTCGGAGAATG GGCCGATGAGTTCGAGGTCGTCAAATCGTTTTGGCGCTTACATGAAGACGGGATCGACCTCTACTACTGGCTCGACAACA TCGAGACCCAGCGAACGCTCGAATCGATGGCGACCGACGTCGAATTGCGTCATCGTTCCCTCACCTGGGGGCAGCTCGAG CGCGAACAGGAACAGCTCGGTCTCGGCATTCAAGATACGCTACGCAGTCACCGCTCCTCGTGA
Upstream 100 bases:
>100_bases ACAGTTATAAAAAGCAACCATTTTCTTAATGTTTTTTCAAAAATGGAATCGGGAACAGATATAACAGCATAAACTATCAG AGAAAAGGGGCGCGACCGCC
Downstream 100 bases:
>100_bases GCGGTTTTTTCAATTTGAATTTCATCCTTACTCGTATTGACAATGGTTTGAAAATAGTGGCGATACGGATGCATGAACAA TTCATATTGCAGACGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSKWGNRFKKWFFSEIEAEITFDPAALIPKQTVTGTLHVSNPTTNVVRLQELTLTFLTTFKDITMEGNEFNREADIQEVP IPLSLVLEPGAKEDVPFSFELTMYAPSSAGAPYSIEATLWDKDIKRVWFDVIEHIEIEPMPELKRLLDATAHAGLEPMFV RNVIDPLGEERPYPFVEKYGFKPVGEWADEFEVVKSFWRLHEDGIDLYYWLDNIETQRTLESMATDVELRHRSLTWGQLE REQEQLGLGIQDTLRSHRSS
Sequences:
>Translated_260_residues MSKWGNRFKKWFFSEIEAEITFDPAALIPKQTVTGTLHVSNPTTNVVRLQELTLTFLTTFKDITMEGNEFNREADIQEVP IPLSLVLEPGAKEDVPFSFELTMYAPSSAGAPYSIEATLWDKDIKRVWFDVIEHIEIEPMPELKRLLDATAHAGLEPMFV RNVIDPLGEERPYPFVEKYGFKPVGEWADEFEVVKSFWRLHEDGIDLYYWLDNIETQRTLESMATDVELRHRSLTWGQLE REQEQLGLGIQDTLRSHRSS >Mature_259_residues SKWGNRFKKWFFSEIEAEITFDPAALIPKQTVTGTLHVSNPTTNVVRLQELTLTFLTTFKDITMEGNEFNREADIQEVPI PLSLVLEPGAKEDVPFSFELTMYAPSSAGAPYSIEATLWDKDIKRVWFDVIEHIEIEPMPELKRLLDATAHAGLEPMFVR NVIDPLGEERPYPFVEKYGFKPVGEWADEFEVVKSFWRLHEDGIDLYYWLDNIETQRTLESMATDVELRHRSLTWGQLER EQEQLGLGIQDTLRSHRSS
Specific function: Unknown
COG id: COG4326
COG function: function code R; Sporulation control protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30109; Mature: 29978
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWGNRFKKWFFSEIEAEITFDPAALIPKQTVTGTLHVSNPTTNVVRLQELTLTFLTTF CCHHHHHHHHHHHHHHCEEEEECCHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHH KDITMEGNEFNREADIQEVPIPLSLVLEPGAKEDVPFSFELTMYAPSSAGAPYSIEATLW HHHEECCCCCCCCCCCHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHH DKDIKRVWFDVIEHIEIEPMPELKRLLDATAHAGLEPMFVRNVIDPLGEERPYPFVEKYG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCC FKPVGEWADEFEVVKSFWRLHEDGIDLYYWLDNIETQRTLESMATDVELRHRSLTWGQLE CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHH REQEQLGLGIQDTLRSHRSS HHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure SKWGNRFKKWFFSEIEAEITFDPAALIPKQTVTGTLHVSNPTTNVVRLQELTLTFLTTF CHHHHHHHHHHHHHHCEEEEECCHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHH KDITMEGNEFNREADIQEVPIPLSLVLEPGAKEDVPFSFELTMYAPSSAGAPYSIEATLW HHHEECCCCCCCCCCCHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHH DKDIKRVWFDVIEHIEIEPMPELKRLLDATAHAGLEPMFVRNVIDPLGEERPYPFVEKYG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCC FKPVGEWADEFEVVKSFWRLHEDGIDLYYWLDNIETQRTLESMATDVELRHRSLTWGQLE CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHH REQEQLGLGIQDTLRSHRSS HHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA