Click here to switch to the map view.

The map label for this gene is pncA [H]

Identifier: 229917782

GI number: 229917782

Start: 2012205

End: 2012738

Strand: Reverse

Name: pncA [H]

Synonym: EAT1b_2060

Alternate gene names: 229917782

Gene position: 2012738-2012205 (Counterclockwise)

Preceding gene: 229917793

Following gene: 229917781

Centisome position: 67.09

GC content: 52.06

Gene sequence:

>534_bases
ATGCGCGCATTGATTGTTATTGATTATACATTTGATTTTATCGCAGACAGTGGTCGTTTGACTTGTGGGAAACCCGGGCA
AGAGATTGAAGAACGGATCGTCGAGTTGATCGGGACATTCGCAACGGAGGACTATGTCGTCATTGCGAACGACGTCCACG
ATGCAGGTGACACGTTCCACCCTGAAACGACGTTGTTCCCACCGCACAATATCCGCGGGACAGAGGGCCGTGAATTGTAC
GGTACTGTGAAGGAAGCGGCGAAACAGGCAGATCACTGGATTGATAAGACACGTTATAGTGCCTTCGCCGGAACTGACCT
TGACCTGCGTCTTCGGGAACGCGGAATCACAGAAGTTCATCTCGTCGGTGTCTGCACGGATATTTGTGTACTCCATACAG
CCGTAGATGCCTACAACCTCGGTTATCAAATCGTCGTCCATGCCGATGCCGTCCAAAGCTTCAACCCGGTCGGTCATGAA
TGGGCGCTCGAACATTTCGTCACGACACTCGGTGCGACCGTCGTCGGAAAGTGA

Upstream 100 bases:

>100_bases
CTACCCAAACCGGAGAAAAATAATCTTCCGCGCATGATGTATAATGAATTAGAATGAGGTGGATAGCCATCATTTTGATT
ACGAGAGAGGAGCATCTCCC

Downstream 100 bases:

>100_bases
CGTAAAACAGAAAGGAAACCATATGTTACATCGCAATTTAGCACTTCACACTGACCTTTATCTCCCACGCTGGATGTATA
TCTACTGGAAGCAAGGTCGC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRALIVIDYTFDFIADSGRLTCGKPGQEIEERIVELIGTFATEDYVVIANDVHDAGDTFHPETTLFPPHNIRGTEGRELY
GTVKEAAKQADHWIDKTRYSAFAGTDLDLRLRERGITEVHLVGVCTDICVLHTAVDAYNLGYQIVVHADAVQSFNPVGHE
WALEHFVTTLGATVVGK

Sequences:

>Translated_177_residues
MRALIVIDYTFDFIADSGRLTCGKPGQEIEERIVELIGTFATEDYVVIANDVHDAGDTFHPETTLFPPHNIRGTEGRELY
GTVKEAAKQADHWIDKTRYSAFAGTDLDLRLRERGITEVHLVGVCTDICVLHTAVDAYNLGYQIVVHADAVQSFNPVGHE
WALEHFVTTLGATVVGK
>Mature_177_residues
MRALIVIDYTFDFIADSGRLTCGKPGQEIEERIVELIGTFATEDYVVIANDVHDAGDTFHPETTLFPPHNIRGTEGRELY
GTVKEAAKQADHWIDKTRYSAFAGTDLDLRLRERGITEVHLVGVCTDICVLHTAVDAYNLGYQIVVHADAVQSFNPVGHE
WALEHFVTTLGATVVGK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19599; Mature: 19599

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALIVIDYTFDFIADSGRLTCGKPGQEIEERIVELIGTFATEDYVVIANDVHDAGDTFH
CCEEEEEEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
PETTLFPPHNIRGTEGRELYGTVKEAAKQADHWIDKTRYSAFAGTDLDLRLRERGITEVH
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCEEE
LVGVCTDICVLHTAVDAYNLGYQIVVHADAVQSFNPVGHEWALEHFVTTLGATVVGK
HHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRALIVIDYTFDFIADSGRLTCGKPGQEIEERIVELIGTFATEDYVVIANDVHDAGDTFH
CCEEEEEEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
PETTLFPPHNIRGTEGRELYGTVKEAAKQADHWIDKTRYSAFAGTDLDLRLRERGITEVH
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCEEE
LVGVCTDICVLHTAVDAYNLGYQIVVHADAVQSFNPVGHEWALEHFVTTLGATVVGK
HHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]