Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is yuiD [H]
Identifier: 229917752
GI number: 229917752
Start: 1982640
End: 1983053
Strand: Reverse
Name: yuiD [H]
Synonym: EAT1b_2030
Alternate gene names: 229917752
Gene position: 1983053-1982640 (Counterclockwise)
Preceding gene: 229917753
Following gene: 229917751
Centisome position: 66.1
GC content: 51.45
Gene sequence:
>414_bases ATGTTTAACGAACCTTTACTCGCCGCGATTCTCGCTTGGTTTATCGCCCAAGCGGCCAAGCTCGTAACTGAACTCATTAA AACAAGAGATTTTGAAATTGAAATCATGTTCGCTTCAGGCGGCATGCCAAGTTCGCACTCGTCCACCGTCGTCGCACTCG CTACGGCAATCGGGCGAATGGAAGGCATTGACTCAAGTCTATTCGCTCTCGCTGTCGTCTTTGCCACCATCGTCATGTAT GATGCGACCGGAGTTCGGCAGGCGGTCGGTTTCCAAGCACGGCTCTTGAACGATTATTTCAAAGGGATCAAACATGAGAC CCCGCTCTTGAATGAGCTTGTCGGCCATACGCCGTTCCAGGTCATCGTCGGAGCGCTACTCGGTCTCGTCGTCGGATTGT TTTTCCCAATGTAA
Upstream 100 bases:
>100_bases CGTGTCCAAGACATCTTTTTTTGACGAAATCTTAACGTCTAGCTTGCTCCTCTTTCGGGTATATTGAAGATACTATGTCA GACAGGAAGTGAATGTACGC
Downstream 100 bases:
>100_bases TGGAACAAGGTATGTCATTTCTCACACTCTTGATTCTTTTTGTGAAGTTTCACAAAGAAGAAGTTATACTCAAGAGAGAG GAGGAATCGACATGCCTTTT
Product: acid phosphatase/vanadium-dependent haloperoxidase related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MFNEPLLAAILAWFIAQAAKLVTELIKTRDFEIEIMFASGGMPSSHSSTVVALATAIGRMEGIDSSLFALAVVFATIVMY DATGVRQAVGFQARLLNDYFKGIKHETPLLNELVGHTPFQVIVGALLGLVVGLFFPM
Sequences:
>Translated_137_residues MFNEPLLAAILAWFIAQAAKLVTELIKTRDFEIEIMFASGGMPSSHSSTVVALATAIGRMEGIDSSLFALAVVFATIVMY DATGVRQAVGFQARLLNDYFKGIKHETPLLNELVGHTPFQVIVGALLGLVVGLFFPM >Mature_137_residues MFNEPLLAAILAWFIAQAAKLVTELIKTRDFEIEIMFASGGMPSSHSSTVVALATAIGRMEGIDSSLFALAVVFATIVMY DATGVRQAVGFQARLLNDYFKGIKHETPLLNELVGHTPFQVIVGALLGLVVGLFFPM
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 14789; Mature: 14789
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNEPLLAAILAWFIAQAAKLVTELIKTRDFEIEIMFASGGMPSSHSSTVVALATAIGRM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH EGIDSSLFALAVVFATIVMYDATGVRQAVGFQARLLNDYFKGIKHETPLLNELVGHTPFQ HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH VIVGALLGLVVGLFFPM HHHHHHHHHHHHHHCCC >Mature Secondary Structure MFNEPLLAAILAWFIAQAAKLVTELIKTRDFEIEIMFASGGMPSSHSSTVVALATAIGRM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH EGIDSSLFALAVVFATIVMYDATGVRQAVGFQARLLNDYFKGIKHETPLLNELVGHTPFQ HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH VIVGALLGLVVGLFFPM HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]