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The map label for this gene is yhdP [H]

Identifier: 229917677

GI number: 229917677

Start: 1913765

End: 1915087

Strand: Reverse

Name: yhdP [H]

Synonym: EAT1b_1954

Alternate gene names: 229917677

Gene position: 1915087-1913765 (Counterclockwise)

Preceding gene: 229917679

Following gene: 229917676

Centisome position: 63.84

GC content: 47.47

Gene sequence:

>1323_bases
TTGGACAGTCCCATGTTACTCAGCTTACTCGTCGTCGCACTTTTAATCTTTTTGACTGCCTTTTTTGTGGCAGCCGAATT
TTCAATTGTGAAAGTGCGTGGCGCTCGACTCGACCAGCTCGTGCTCGAAGGAAATAAGAAAGCGGTCAGCGCGAAAAAAG
TCATCGAGAATATCGACGACTCCCTTTCTGCCTCGCAGTTCGGAATCACGCTTTCTGCACTCGGTCTTGGGTGGATTGGT
GCCGATCAAATCGAAACGTATATCCACACATTGGTCGAACAATTGAACATATCGCCTTCTCTCGTGACATTCTTGTCGTT
TCTGATTGCCTTCTTATTGATTGCGTTCGTCCATGTCGTCATCGGTGAACTCGTGCCAAAAACGCTCGCGGTTCACGAAG
CGGAGAAGTTGACGCTGCTCGTCGCACGTCCGCTCTACGTCTTCACAAAAATCTTCTATCCGTTTATTCGAGCATTGAAC
AGTATGGCTCGAATCACACTCCGTTTATTCGGGGTACAGACGACAGCGCAGGAAACGGCACACTCTGAAGAAGAATTGAA
AATCATTATGACGGAAAGTTTCCGTAGTGGTGAGATTAACGAAAACGAATTGGCATATGTTCAAAATATCTTCTCCTTTG
ACGAACGGATCGCCAAAGATGCCATGGTACCACGAATGAACATGGTGACAATTGATGAAGAAGATACGATCGAAGAGATC
ATCGCCGTAGTAGAAGAGCACCAGTATACGCGCTATCCCGTCACACGAGATGGCGATCGTGATGACGTTCTCGGATTCGT
GAATGCGAAACAACTCTTCACTGCCCAACTTTCAAAAAATGACGCGCCATTCGAATCGTTCATTCATCAATTGCCGCTCG
TCACCGAGTTCACACCGCTTCAAGAAGCGATGGTGAAAATGCAAAATGCACAGACGATGATGTGTCTCGTCATCGATGAG
TATGGTGGGACGGCAGGACTGTTGACGATTGAAGACATTTTAGAAGAAATCGTCGGCGAGATTCGAGACGAGTTCGATCG
AGATGAGCAGGCTGAAATTACAGAAGTTGCTCCGAAACATTACCGCCTTTCAGGACTCGTTTTAACGCAAGAACTGGAGG
AACGGTTCGGCATCGAAATCGAGGATGACGTCGATACGGTCGGTGGTTTCGTTTTATCACAAAAAGCGAATGCGCGAACG
GGGGAACGCTTCCTTTTACCTGGCGACCATGAACTGATTGTCAGTGAAGTCGATAACCACCGCATCGTCTTCGTCGACTT
GATTCTCGCCTCTCATGAAGAGGAAGAACCACTGTCTGAATGA

Upstream 100 bases:

>100_bases
ATCAACTATACTGAAACAAACTATTCGTTTTCAGGAAACGCCTGAAAGACGTTTGATCTTATACTCAATGGAGGTGACTC
CCCGATTTTAGGGGGAATTG

Downstream 100 bases:

>100_bases
TGCATCTTTCAAACCCTTCTCTAAAATATGGAGAAGGGTTTTTCACGTTTGCACCGAACTGTCGCTATATTTTCGCCTCT
TGCCGTGATATACTGCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MDSPMLLSLLVVALLIFLTAFFVAAEFSIVKVRGARLDQLVLEGNKKAVSAKKVIENIDDSLSASQFGITLSALGLGWIG
ADQIETYIHTLVEQLNISPSLVTFLSFLIAFLLIAFVHVVIGELVPKTLAVHEAEKLTLLVARPLYVFTKIFYPFIRALN
SMARITLRLFGVQTTAQETAHSEEELKIIMTESFRSGEINENELAYVQNIFSFDERIAKDAMVPRMNMVTIDEEDTIEEI
IAVVEEHQYTRYPVTRDGDRDDVLGFVNAKQLFTAQLSKNDAPFESFIHQLPLVTEFTPLQEAMVKMQNAQTMMCLVIDE
YGGTAGLLTIEDILEEIVGEIRDEFDRDEQAEITEVAPKHYRLSGLVLTQELEERFGIEIEDDVDTVGGFVLSQKANART
GERFLLPGDHELIVSEVDNHRIVFVDLILASHEEEEPLSE

Sequences:

>Translated_440_residues
MDSPMLLSLLVVALLIFLTAFFVAAEFSIVKVRGARLDQLVLEGNKKAVSAKKVIENIDDSLSASQFGITLSALGLGWIG
ADQIETYIHTLVEQLNISPSLVTFLSFLIAFLLIAFVHVVIGELVPKTLAVHEAEKLTLLVARPLYVFTKIFYPFIRALN
SMARITLRLFGVQTTAQETAHSEEELKIIMTESFRSGEINENELAYVQNIFSFDERIAKDAMVPRMNMVTIDEEDTIEEI
IAVVEEHQYTRYPVTRDGDRDDVLGFVNAKQLFTAQLSKNDAPFESFIHQLPLVTEFTPLQEAMVKMQNAQTMMCLVIDE
YGGTAGLLTIEDILEEIVGEIRDEFDRDEQAEITEVAPKHYRLSGLVLTQELEERFGIEIEDDVDTVGGFVLSQKANART
GERFLLPGDHELIVSEVDNHRIVFVDLILASHEEEEPLSE
>Mature_440_residues
MDSPMLLSLLVVALLIFLTAFFVAAEFSIVKVRGARLDQLVLEGNKKAVSAKKVIENIDDSLSASQFGITLSALGLGWIG
ADQIETYIHTLVEQLNISPSLVTFLSFLIAFLLIAFVHVVIGELVPKTLAVHEAEKLTLLVARPLYVFTKIFYPFIRALN
SMARITLRLFGVQTTAQETAHSEEELKIIMTESFRSGEINENELAYVQNIFSFDERIAKDAMVPRMNMVTIDEEDTIEEI
IAVVEEHQYTRYPVTRDGDRDDVLGFVNAKQLFTAQLSKNDAPFESFIHQLPLVTEFTPLQEAMVKMQNAQTMMCLVIDE
YGGTAGLLTIEDILEEIVGEIRDEFDRDEQAEITEVAPKHYRLSGLVLTQELEERFGIEIEDDVDTVGGFVLSQKANART
GERFLLPGDHELIVSEVDNHRIVFVDLILASHEEEEPLSE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=404, Percent_Identity=47.5247524752475, Blast_Score=403, Evalue=1e-112,
Organism=Escherichia coli, GI1790664, Length=429, Percent_Identity=23.0769230769231, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI145693175, Length=381, Percent_Identity=26.246719160105, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1786879, Length=263, Percent_Identity=28.8973384030418, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082033, Length=362, Percent_Identity=25.1381215469613, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788119, Length=276, Percent_Identity=24.2753623188406, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 49428; Mature: 49428

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSPMLLSLLVVALLIFLTAFFVAAEFSIVKVRGARLDQLVLEGNKKAVSAKKVIENIDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHH
SLSASQFGITLSALGLGWIGADQIETYIHTLVEQLNISPSLVTFLSFLIAFLLIAFVHVV
HCCHHHHCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IGELVPKTLAVHEAEKLTLLVARPLYVFTKIFYPFIRALNSMARITLRLFGVQTTAQETA
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
HSEEELKIIMTESFRSGEINENELAYVQNIFSFDERIAKDAMVPRMNMVTIDEEDTIEEI
CCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
IAVVEEHQYTRYPVTRDGDRDDVLGFVNAKQLFTAQLSKNDAPFESFIHQLPLVTEFTPL
HHHHHHCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHH
QEAMVKMQNAQTMMCLVIDEYGGTAGLLTIEDILEEIVGEIRDEFDRDEQAEITEVAPKH
HHHHHHHHCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
YRLSGLVLTQELEERFGIEIEDDVDTVGGFVLSQKANARTGERFLLPGDHELIVSEVDNH
EEHHHHHHHHHHHHHHCCEECCCHHHHCCHHEECCCCCCCCCEEECCCCCCEEEEECCCC
RIVFVDLILASHEEEEPLSE
EEEEEEEEHHCCCCCCCCCC
>Mature Secondary Structure
MDSPMLLSLLVVALLIFLTAFFVAAEFSIVKVRGARLDQLVLEGNKKAVSAKKVIENIDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHH
SLSASQFGITLSALGLGWIGADQIETYIHTLVEQLNISPSLVTFLSFLIAFLLIAFVHVV
HCCHHHHCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IGELVPKTLAVHEAEKLTLLVARPLYVFTKIFYPFIRALNSMARITLRLFGVQTTAQETA
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
HSEEELKIIMTESFRSGEINENELAYVQNIFSFDERIAKDAMVPRMNMVTIDEEDTIEEI
CCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
IAVVEEHQYTRYPVTRDGDRDDVLGFVNAKQLFTAQLSKNDAPFESFIHQLPLVTEFTPL
HHHHHHCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHH
QEAMVKMQNAQTMMCLVIDEYGGTAGLLTIEDILEEIVGEIRDEFDRDEQAEITEVAPKH
HHHHHHHHCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
YRLSGLVLTQELEERFGIEIEDDVDTVGGFVLSQKANARTGERFLLPGDHELIVSEVDNH
EEHHHHHHHHHHHHHHCCEECCCHHHHCCHHEECCCCCCCCCEEECCCCCCEEEEECCCC
RIVFVDLILASHEEEEPLSE
EEEEEEEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]