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The map label for this gene is yobO [H]

Identifier: 229917666

GI number: 229917666

Start: 1904013

End: 1905611

Strand: Reverse

Name: yobO [H]

Synonym: EAT1b_1943

Alternate gene names: 229917666

Gene position: 1905611-1904013 (Counterclockwise)

Preceding gene: 229917671

Following gene: 229917663

Centisome position: 63.52

GC content: 51.41

Gene sequence:

>1599_bases
ATGAAAAACGTAAAGGACCCACAATCAATCGCATCGATGATTGCCTCTTATTCCGCTTGGCCGGAAGAAGACCTCATCCA
GCGAACACTCGAATGGCACCGCTCCACGCGCGAGACATCTTACTCAGAGCAGCAACAATCCATCCCTTGCCGAATTCCAA
TGACTGAGCGCATTACGCCTGTTCAAACGTCACTCCCGCTCGAACAAATGGACGGAATGGTTCGTCCTGTTTGGATGCGC
CGCCTCGATGCGGAATATTTGAACCTAATGCAGGTCACAAAACAACGTGTTGATGTGACAGACTATGGCGCCGTCGGGGA
CGGACAAACGGATTGCACGCTCGCTTTTCGTCTCGCCCTCCGCTCGAACCGCCGCGTCTTTGTCCCGGCAGGTGTGTATA
TCGTTCGGGGCATTCGCCTTCCTTCGAACTGCGTGTTAGAAGGTGCCGGACAGGACGTCACCATTCTAAAACTATCGGAT
CGTGCGCCAAAGCATCGAAGACTGTTACGAAACGCCACCCCATTTGCGGGAAACCATCATATCGAGGTATGTCACCTGAC
ACTCGATTGGAACGTCGCACGATTAGGCGATGTGAAACGGACGACGAGCGGTGACACGACATCGAGCGCCTTGACGTTTG
CCCATGTGACGTATGGCTGGGTGCATCATGTGACGGCTAAAAATGCCGGTCTTCATGCGTTCGACATCACGTCTCCACAT
TATCATTACTTAGGAGACGGCCTCCGTGCCGCAAACGGCAGTCGGTATATTCATCTTGATCATCTCGAGGCGACGAATTA
TGGGGATGACGGAATCACCACACATCACAGTGATGCCATCTACATCACGAACTGCTATTGTCATCATCCTCACGGCCGAA
CACACGCCGTTGGATTCTCAAACTCGAACGGCATTGAGATCGACGACGGATCGCGGCACGTCACACTCGTAAACAATAAA
AGTGAAGGGTGTTTTGGCGGAATCGAAGTAAAAGCACATGGGACCTCATCTGCCGCACACGACGTTCATATCTTCGGCCA
TCTTTCGGTGCATGACAATCGTTCATTTAACTTCCGTCACATCGGTCATCATTTAGCAGACGATCCGAACTCAGAGACAG
CCCGCTTCCTATCAGGCACAAACTTAGTGTCCGTCGAGCCGGTTCACAGTTCACTCTATACAAAATCCTCACCACGAAGC
CTGGTTGTATCGGCCTATCAGGACGTCTTGATTCATGGTTTGACTGCAATCGGCGACCCGACCTACGATTACGAACAACA
TCCGGCACTTGCGATCCAATACAAATCGAGACGCGTTCAACTGAAACGAATCGCCGTGCGCGGGTTTACCACAGCCCGAG
CTGACCTCGAACTATTTGGGGGAGATAACCGCACCGATGAAGTGACTATCGATGCCTTACGATGCCAAGAATCTGCACCC
ATCGCTCTAAAAATCGGTCGTCAACTTGAACACCTTGCTCTTCATCAGATTGAAGGACAGAAAAAAAGCGGAGATGTTCT
CATCTCCACGAAAAGTCCGATTGAGGTGCATGATCTACTCGCTCAAGGATTTTCAGATCGGGTGCGCTCAGACGTGTGA

Upstream 100 bases:

>100_bases
TAACACGACTAGATGTTTCTGTCTAGTAAATACTTCTGATTGCTAAAAAACAAGGTGAAACGGGTACATGCTAGAGAAGA
TGATGCTAGGAGGATTTATT

Downstream 100 bases:

>100_bases
GCCGCTTCCACGAGTTGATTCAGTTTGGCATCATCAAGTTGAAGTGAACTCTCTTTTTGTTTGGCCATCATGCGGACAAT
CGCTTTGTCTAAAAATCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKNVKDPQSIASMIASYSAWPEEDLIQRTLEWHRSTRETSYSEQQQSIPCRIPMTERITPVQTSLPLEQMDGMVRPVWMR
RLDAEYLNLMQVTKQRVDVTDYGAVGDGQTDCTLAFRLALRSNRRVFVPAGVYIVRGIRLPSNCVLEGAGQDVTILKLSD
RAPKHRRLLRNATPFAGNHHIEVCHLTLDWNVARLGDVKRTTSGDTTSSALTFAHVTYGWVHHVTAKNAGLHAFDITSPH
YHYLGDGLRAANGSRYIHLDHLEATNYGDDGITTHHSDAIYITNCYCHHPHGRTHAVGFSNSNGIEIDDGSRHVTLVNNK
SEGCFGGIEVKAHGTSSAAHDVHIFGHLSVHDNRSFNFRHIGHHLADDPNSETARFLSGTNLVSVEPVHSSLYTKSSPRS
LVVSAYQDVLIHGLTAIGDPTYDYEQHPALAIQYKSRRVQLKRIAVRGFTTARADLELFGGDNRTDEVTIDALRCQESAP
IALKIGRQLEHLALHQIEGQKKSGDVLISTKSPIEVHDLLAQGFSDRVRSDV

Sequences:

>Translated_532_residues
MKNVKDPQSIASMIASYSAWPEEDLIQRTLEWHRSTRETSYSEQQQSIPCRIPMTERITPVQTSLPLEQMDGMVRPVWMR
RLDAEYLNLMQVTKQRVDVTDYGAVGDGQTDCTLAFRLALRSNRRVFVPAGVYIVRGIRLPSNCVLEGAGQDVTILKLSD
RAPKHRRLLRNATPFAGNHHIEVCHLTLDWNVARLGDVKRTTSGDTTSSALTFAHVTYGWVHHVTAKNAGLHAFDITSPH
YHYLGDGLRAANGSRYIHLDHLEATNYGDDGITTHHSDAIYITNCYCHHPHGRTHAVGFSNSNGIEIDDGSRHVTLVNNK
SEGCFGGIEVKAHGTSSAAHDVHIFGHLSVHDNRSFNFRHIGHHLADDPNSETARFLSGTNLVSVEPVHSSLYTKSSPRS
LVVSAYQDVLIHGLTAIGDPTYDYEQHPALAIQYKSRRVQLKRIAVRGFTTARADLELFGGDNRTDEVTIDALRCQESAP
IALKIGRQLEHLALHQIEGQKKSGDVLISTKSPIEVHDLLAQGFSDRVRSDV
>Mature_532_residues
MKNVKDPQSIASMIASYSAWPEEDLIQRTLEWHRSTRETSYSEQQQSIPCRIPMTERITPVQTSLPLEQMDGMVRPVWMR
RLDAEYLNLMQVTKQRVDVTDYGAVGDGQTDCTLAFRLALRSNRRVFVPAGVYIVRGIRLPSNCVLEGAGQDVTILKLSD
RAPKHRRLLRNATPFAGNHHIEVCHLTLDWNVARLGDVKRTTSGDTTSSALTFAHVTYGWVHHVTAKNAGLHAFDITSPH
YHYLGDGLRAANGSRYIHLDHLEATNYGDDGITTHHSDAIYITNCYCHHPHGRTHAVGFSNSNGIEIDDGSRHVTLVNNK
SEGCFGGIEVKAHGTSSAAHDVHIFGHLSVHDNRSFNFRHIGHHLADDPNSETARFLSGTNLVSVEPVHSSLYTKSSPRS
LVVSAYQDVLIHGLTAIGDPTYDYEQHPALAIQYKSRRVQLKRIAVRGFTTARADLELFGGDNRTDEVTIDALRCQESAP
IALKIGRQLEHLALHQIEGQKKSGDVLISTKSPIEVHDLLAQGFSDRVRSDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021865
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF11962 DUF3476 [H]

EC number: NA

Molecular weight: Translated: 59209; Mature: 59209

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVKDPQSIASMIASYSAWPEEDLIQRTLEWHRSTRETSYSEQQQSIPCRIPMTERITP
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECCCCCCCCC
VQTSLPLEQMDGMVRPVWMRRLDAEYLNLMQVTKQRVDVTDYGAVGDGQTDCTLAFRLAL
CHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEH
RSNRRVFVPAGVYIVRGIRLPSNCVLEGAGQDVTILKLSDRAPKHRRLLRNATPFAGNHH
HCCCEEEEECCEEEEEEECCCCCCEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCE
IEVCHLTLDWNVARLGDVKRTTSGDTTSSALTFAHVTYGWVHHVTAKNAGLHAFDITSPH
EEEEEEEEECCCHHCCCCCCCCCCCCCCCEEEEEEEHHHEEEEEEECCCCEEEEECCCCC
YHYLGDGLRAANGSRYIHLDHLEATNYGDDGITTHHSDAIYITNCYCHHPHGRTHAVGFS
HHHHCCCEECCCCCEEEEEEEEECCCCCCCCCEEECCCEEEEEEEEEECCCCCEEEEECC
NSNGIEIDDGSRHVTLVNNKSEGCFGGIEVKAHGTSSAAHDVHIFGHLSVHDNRSFNFRH
CCCCEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCHHH
IGHHLADDPNSETARFLSGTNLVSVEPVHSSLYTKSSPRSLVVSAYQDVLIHGLTAIGDP
HCHHHCCCCCCCHHHHCCCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TYDYEQHPALAIQYKSRRVQLKRIAVRGFTTARADLELFGGDNRTDEVTIDALRCQESAP
CCCCCCCCEEEEEECCCEEEEEEEEEECCEECCCEEEEECCCCCCCEEEEEEEECCCCCC
IALKIGRQLEHLALHQIEGQKKSGDVLISTKSPIEVHDLLAQGFSDRVRSDV
EEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure
MKNVKDPQSIASMIASYSAWPEEDLIQRTLEWHRSTRETSYSEQQQSIPCRIPMTERITP
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECCCCCCCCC
VQTSLPLEQMDGMVRPVWMRRLDAEYLNLMQVTKQRVDVTDYGAVGDGQTDCTLAFRLAL
CHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEH
RSNRRVFVPAGVYIVRGIRLPSNCVLEGAGQDVTILKLSDRAPKHRRLLRNATPFAGNHH
HCCCEEEEECCEEEEEEECCCCCCEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCE
IEVCHLTLDWNVARLGDVKRTTSGDTTSSALTFAHVTYGWVHHVTAKNAGLHAFDITSPH
EEEEEEEEECCCHHCCCCCCCCCCCCCCCEEEEEEEHHHEEEEEEECCCCEEEEECCCCC
YHYLGDGLRAANGSRYIHLDHLEATNYGDDGITTHHSDAIYITNCYCHHPHGRTHAVGFS
HHHHCCCEECCCCCEEEEEEEEECCCCCCCCCEEECCCEEEEEEEEEECCCCCEEEEECC
NSNGIEIDDGSRHVTLVNNKSEGCFGGIEVKAHGTSSAAHDVHIFGHLSVHDNRSFNFRH
CCCCEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCHHH
IGHHLADDPNSETARFLSGTNLVSVEPVHSSLYTKSSPRSLVVSAYQDVLIHGLTAIGDP
HCHHHCCCCCCCHHHHCCCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TYDYEQHPALAIQYKSRRVQLKRIAVRGFTTARADLELFGGDNRTDEVTIDALRCQESAP
CCCCCCCCEEEEEECCCEEEEEEEEEECCEECCCEEEEECCCCCCCEEEEEEEECCCCCC
IALKIGRQLEHLALHQIEGQKKSGDVLISTKSPIEVHDLLAQGFSDRVRSDV
EEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]