| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
Click here to switch to the map view.
The map label for this gene is 227826991
Identifier: 227826991
GI number: 227826991
Start: 594708
End: 595634
Strand: Direct
Name: 227826991
Synonym: M1425_0648
Alternate gene names: NA
Gene position: 594708-595634 (Clockwise)
Preceding gene: 227826988
Following gene: 227826993
Centisome position: 22.8
GC content: 31.82
Gene sequence:
>927_bases ATGTCGAAAGAAGGATCTAGTAATGAGAATATAGAGACAAATATATCTAAAGATTTAGTTACCGTTGTTTTATGTACTTT AAATGAGGAGGAAGGAATAGGGAAAGTTTTAGATGATCTGAAAGCTAATGGATATGAAAATATTTTAGTGATAGACGGAT ACTCAACTGATGCTACTGTAAAAATAGCTAGAGAAAGGGGAGCTAGAGTAATTTATCAACATTGGTCTGGAAAAGCAGGT GCAGTAAAAACGGCTCTTGATTACGTCGACACACCATATGTAGCATTTTTAGATGCAGATGCAACTTATCCTCCTAAAGA GTTAGATAAGCTGATTCTACACGTTCCAAAATACGTTGAAATAATAGGTAAGAGATCTAAAGAAAATATTCCATTATTAC ATAGATTTGGAAATGCGTTAATTAATAAGTTATTTGCCTTGATATTCTCAGTTGATGTAGGGGATGTTCTTTCTGGTATG TATGTTCTTCATACTAATTTAGCTAAAACACTTAATCTGAATTCTAAAGGGTTTGAAATAGAGATCGAAATAGTGTCTCA GATGGTACAGAGAGGGAAAGTAACATATGTGGATATAAGATATGAGAAGAGAAGAGGGAAAAGAAAACTATCTAGCTTTA AAGACGGTATGAAAATAGTATCTTATCTTATAAAGATGGCAAAAGATTATAACCCAATCTTATTCTTTTCTATAATTGCA AGCATATTCTTATTTCCAGGATTAATAACTTTAGGATACACATTCATAGACTATTTACTCCACGGTATTTTCCATAGTGG ATATGCACTTATGGGAACAGCACTAACATTAGTTGGAGTTCAAGGATTTTTAACTGCGGGAACAGCAACTATATTAAAAC GAATAGAATATCATATTTTACATAATAATAATAGTAGAGTACAATAA
Upstream 100 bases:
>100_bases TTTTTGAAAAATCTAAATATATAATTTGACGTTTTTGATATATAAAATCTATTTCTTTTTACACAAAATGCTTAAATGTT AAGGCTTATATTTATATCTG
Downstream 100 bases:
>100_bases TAATATAATTCTACTATTATGTTAGAGTGGAACATTAGCTCATACCCAGCTATAACATTTTGTGCTCTTATAAACCCTCA AACAAGAAAAATTTATTTCA
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSKEGSSNENIETNISKDLVTVVLCTLNEEEGIGKVLDDLKANGYENILVIDGYSTDATVKIARERGARVIYQHWSGKAG AVKTALDYVDTPYVAFLDADATYPPKELDKLILHVPKYVEIIGKRSKENIPLLHRFGNALINKLFALIFSVDVGDVLSGM YVLHTNLAKTLNLNSKGFEIEIEIVSQMVQRGKVTYVDIRYEKRRGKRKLSSFKDGMKIVSYLIKMAKDYNPILFFSIIA SIFLFPGLITLGYTFIDYLLHGIFHSGYALMGTALTLVGVQGFLTAGTATILKRIEYHILHNNNSRVQ
Sequences:
>Translated_308_residues MSKEGSSNENIETNISKDLVTVVLCTLNEEEGIGKVLDDLKANGYENILVIDGYSTDATVKIARERGARVIYQHWSGKAG AVKTALDYVDTPYVAFLDADATYPPKELDKLILHVPKYVEIIGKRSKENIPLLHRFGNALINKLFALIFSVDVGDVLSGM YVLHTNLAKTLNLNSKGFEIEIEIVSQMVQRGKVTYVDIRYEKRRGKRKLSSFKDGMKIVSYLIKMAKDYNPILFFSIIA SIFLFPGLITLGYTFIDYLLHGIFHSGYALMGTALTLVGVQGFLTAGTATILKRIEYHILHNNNSRVQ >Mature_307_residues SKEGSSNENIETNISKDLVTVVLCTLNEEEGIGKVLDDLKANGYENILVIDGYSTDATVKIARERGARVIYQHWSGKAGA VKTALDYVDTPYVAFLDADATYPPKELDKLILHVPKYVEIIGKRSKENIPLLHRFGNALINKLFALIFSVDVGDVLSGMY VLHTNLAKTLNLNSKGFEIEIEIVSQMVQRGKVTYVDIRYEKRRGKRKLSSFKDGMKIVSYLIKMAKDYNPILFFSIIAS IFLFPGLITLGYTFIDYLLHGIFHSGYALMGTALTLVGVQGFLTAGTATILKRIEYHILHNNNSRVQ
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34449; Mature: 34317
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEGSSNENIETNISKDLVTVVLCTLNEEEGIGKVLDDLKANGYENILVIDGYSTDATV CCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEE KIARERGARVIYQHWSGKAGAVKTALDYVDTPYVAFLDADATYPPKELDKLILHVPKYVE EEEHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH IIGKRSKENIPLLHRFGNALINKLFALIFSVDVGDVLSGMYVLHTNLAKTLNLNSKGFEI HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE EIEIVSQMVQRGKVTYVDIRYEKRRGKRKLSSFKDGMKIVSYLIKMAKDYNPILFFSIIA EHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SIFLFPGLITLGYTFIDYLLHGIFHSGYALMGTALTLVGVQGFLTAGTATILKRIEYHIL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE HNNNSRVQ ECCCCCCC >Mature Secondary Structure SKEGSSNENIETNISKDLVTVVLCTLNEEEGIGKVLDDLKANGYENILVIDGYSTDATV CCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEE KIARERGARVIYQHWSGKAGAVKTALDYVDTPYVAFLDADATYPPKELDKLILHVPKYVE EEEHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH IIGKRSKENIPLLHRFGNALINKLFALIFSVDVGDVLSGMYVLHTNLAKTLNLNSKGFEI HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE EIEIVSQMVQRGKVTYVDIRYEKRRGKRKLSSFKDGMKIVSYLIKMAKDYNPILFFSIIA EHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SIFLFPGLITLGYTFIDYLLHGIFHSGYALMGTALTLVGVQGFLTAGTATILKRIEYHIL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE HNNNSRVQ ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]