| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is iolF [H]
Identifier: 227826923
GI number: 227826923
Start: 511451
End: 512842
Strand: Direct
Name: iolF [H]
Synonym: M1425_0565
Alternate gene names: 227826923
Gene position: 511451-512842 (Clockwise)
Preceding gene: 227826922
Following gene: 227826925
Centisome position: 19.6
GC content: 39.22
Gene sequence:
>1392_bases ATGAGTGAACCTTCAGATCCTCTAAAAGCACTTGATGAGGCTAAACTATCATCTACGCACTATAGGTGGACAATCCTATC TGCTTTAGCAGATTTTCTTGATGCAGGAGCGATAGTTGCGGGTGCCGCATCAGTAAGTATATGGGTTTCCCTCTTCCATC TTAATTCCCTTCTCTTAGGTATAATAGCTGCGTTAAGTCCAAATGCCTTTGCCGCTGGTATAGGAGCTTGGATAGCTGGA CCACTAGGTGACAGATATGGAAGGAAGGCTATATATACATATGATCTAATCGTATATGCAATAGGTGCAATAATTATATT ATCAGCAATAAATTACTACATGGTTATTATAGGGTATACTATAGTAGGGTTGGCAGTGGGAGTTGACGTACCAACAAGTT GGTCACTAATAGCTGAGCTAGCTCCTAAGAGGAATCGCGGAAGATTAATGTCATTCACTAACTTATTCTGGTATATTGGA CCCATAATAATATTGCTTCTAGGTATAGGCACAGTTCCGTTGGGTGTTAATTCCTTTAGAGTCCTATTCGGGTTTTTGAC AATAGTTGCAATAGTAACATGGGTCTTAAGAAGAGGAATTGCTGAATCCGCTAGATGGGGGCTAGTGAAGGGAAAAGAAG AAGTGGTTAAACAAGCATTAGCGCAATTAGGACAAAGCGTAAGTGTAATACCTAAGGCTGAGACCAAAGGTAAGTGGAGT GATATGTTCAAATATTGGAAAGGATTAGCCTTCATGATCCCAATCTATATTTTCTGGGGAGTACCAGCTGGAACCTTTGG ATTCTTCTTACCTTTCCTCATAGAAGATTTGTCTATCAAAAGTTCTGTAGTAGGTGATCTAGTTCAAATCGCGTGGTTCG TGACTGCAATAATTGGAGTTGTTGGAGTATACATGCAGCTATCAGACAAAGTGAATAGGAAGCTATTATATGCAGTAAGT TCTCTTATTTGCGCAATTGGTTTCGCATTACCTATAGGTTTACCATTCAAGATACTTTGGGTAGCATTATTCAATGTATT CTTATTTGGATTTGGTCATGGAATGGCGTTATGGCCTCAAACTAGAGTCTGGTCAACGGAGCTTTTCCCAACGGAAATAA GAAACACGGCTCAAGGTTTTGTATGGGGCTGGATGAGGATAGCATTGGGAATATGGAGTATCTTCGTACCTTCAATAATT ACAGTAATAGGTTATTCAGCAATAGCTGCAGTAGCTACTTCATTCTTTATACTAAATATTATTTTGGGATTATTAGTGGG ACCGGATACACATGGAAAATCCTTAGAGGTGGTAATAAAGGACTTTTATGGAGGTAAAGTTCCAGTATCTAAAGTAGTAG AAGTGAATACAAGACCTCTTGGCAACAAATAA
Upstream 100 bases:
>100_bases TCTAAGCATATTATGTTTTAAAAATTTACCGGACAGAATACATATCTCCATATAAGTATGGACCCTTACTTATAAACTAT ATATAACATAAATACCAATA
Downstream 100 bases:
>100_bases ACTATTAAAGGTCATACTTTAAGCCAAAACCTTTTTCTTCTCCCAATTCGAAATATCCCTTTATTGGCTTAGGAGGATTT ATCACTCTATCCTCTAGCCA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MSEPSDPLKALDEAKLSSTHYRWTILSALADFLDAGAIVAGAASVSIWVSLFHLNSLLLGIIAALSPNAFAAGIGAWIAG PLGDRYGRKAIYTYDLIVYAIGAIIILSAINYYMVIIGYTIVGLAVGVDVPTSWSLIAELAPKRNRGRLMSFTNLFWYIG PIIILLLGIGTVPLGVNSFRVLFGFLTIVAIVTWVLRRGIAESARWGLVKGKEEVVKQALAQLGQSVSVIPKAETKGKWS DMFKYWKGLAFMIPIYIFWGVPAGTFGFFLPFLIEDLSIKSSVVGDLVQIAWFVTAIIGVVGVYMQLSDKVNRKLLYAVS SLICAIGFALPIGLPFKILWVALFNVFLFGFGHGMALWPQTRVWSTELFPTEIRNTAQGFVWGWMRIALGIWSIFVPSII TVIGYSAIAAVATSFFILNIILGLLVGPDTHGKSLEVVIKDFYGGKVPVSKVVEVNTRPLGNK
Sequences:
>Translated_463_residues MSEPSDPLKALDEAKLSSTHYRWTILSALADFLDAGAIVAGAASVSIWVSLFHLNSLLLGIIAALSPNAFAAGIGAWIAG PLGDRYGRKAIYTYDLIVYAIGAIIILSAINYYMVIIGYTIVGLAVGVDVPTSWSLIAELAPKRNRGRLMSFTNLFWYIG PIIILLLGIGTVPLGVNSFRVLFGFLTIVAIVTWVLRRGIAESARWGLVKGKEEVVKQALAQLGQSVSVIPKAETKGKWS DMFKYWKGLAFMIPIYIFWGVPAGTFGFFLPFLIEDLSIKSSVVGDLVQIAWFVTAIIGVVGVYMQLSDKVNRKLLYAVS SLICAIGFALPIGLPFKILWVALFNVFLFGFGHGMALWPQTRVWSTELFPTEIRNTAQGFVWGWMRIALGIWSIFVPSII TVIGYSAIAAVATSFFILNIILGLLVGPDTHGKSLEVVIKDFYGGKVPVSKVVEVNTRPLGNK >Mature_462_residues SEPSDPLKALDEAKLSSTHYRWTILSALADFLDAGAIVAGAASVSIWVSLFHLNSLLLGIIAALSPNAFAAGIGAWIAGP LGDRYGRKAIYTYDLIVYAIGAIIILSAINYYMVIIGYTIVGLAVGVDVPTSWSLIAELAPKRNRGRLMSFTNLFWYIGP IIILLLGIGTVPLGVNSFRVLFGFLTIVAIVTWVLRRGIAESARWGLVKGKEEVVKQALAQLGQSVSVIPKAETKGKWSD MFKYWKGLAFMIPIYIFWGVPAGTFGFFLPFLIEDLSIKSSVVGDLVQIAWFVTAIIGVVGVYMQLSDKVNRKLLYAVSS LICAIGFALPIGLPFKILWVALFNVFLFGFGHGMALWPQTRVWSTELFPTEIRNTAQGFVWGWMRIALGIWSIFVPSIIT VIGYSAIAAVATSFFILNIILGLLVGPDTHGKSLEVVIKDFYGGKVPVSKVVEVNTRPLGNK
Specific function: Minor myo-inositol uptake transporter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786229, Length=442, Percent_Identity=22.8506787330317, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI87082159, Length=452, Percent_Identity=21.4601769911504, Blast_Score=75, Evalue=8e-15, Organism=Drosophila melanogaster, GI24652795, Length=418, Percent_Identity=22.9665071770335, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24652793, Length=418, Percent_Identity=22.9665071770335, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50475; Mature: 50344
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPSDPLKALDEAKLSSTHYRWTILSALADFLDAGAIVAGAASVSIWVSLFHLNSLLLG CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IIAALSPNAFAAGIGAWIAGPLGDRYGRKAIYTYDLIVYAIGAIIILSAINYYMVIIGYT HHHHHCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVGLAVGVDVPTSWSLIAELAPKRNRGRLMSFTNLFWYIGPIIILLLGIGTVPLGVNSFR HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VLFGFLTIVAIVTWVLRRGIAESARWGLVKGKEEVVKQALAQLGQSVSVIPKAETKGKWS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCHH DMFKYWKGLAFMIPIYIFWGVPAGTFGFFLPFLIEDLSIKSSVVGDLVQIAWFVTAIIGV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVYMQLSDKVNRKLLYAVSSLICAIGFALPIGLPFKILWVALFNVFLFGFGHGMALWPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCC TRVWSTELFPTEIRNTAQGFVWGWMRIALGIWSIFVPSIITVIGYSAIAAVATSFFILNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILGLLVGPDTHGKSLEVVIKDFYGGKVPVSKVVEVNTRPLGNK HHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHEECCCCCCCC >Mature Secondary Structure SEPSDPLKALDEAKLSSTHYRWTILSALADFLDAGAIVAGAASVSIWVSLFHLNSLLLG CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IIAALSPNAFAAGIGAWIAGPLGDRYGRKAIYTYDLIVYAIGAIIILSAINYYMVIIGYT HHHHHCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVGLAVGVDVPTSWSLIAELAPKRNRGRLMSFTNLFWYIGPIIILLLGIGTVPLGVNSFR HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VLFGFLTIVAIVTWVLRRGIAESARWGLVKGKEEVVKQALAQLGQSVSVIPKAETKGKWS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCHH DMFKYWKGLAFMIPIYIFWGVPAGTFGFFLPFLIEDLSIKSSVVGDLVQIAWFVTAIIGV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVYMQLSDKVNRKLLYAVSSLICAIGFALPIGLPFKILWVALFNVFLFGFGHGMALWPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCC TRVWSTELFPTEIRNTAQGFVWGWMRIALGIWSIFVPSIITVIGYSAIAAVATSFFILNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILGLLVGPDTHGKSLEVVIKDFYGGKVPVSKVVEVNTRPLGNK HHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7952181; 9384377; 1761221; 11807058 [H]