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The map label for this gene is 227826838

Identifier: 227826838

GI number: 227826838

Start: 398227

End: 399999

Strand: Direct

Name: 227826838

Synonym: M1425_0459

Alternate gene names: NA

Gene position: 398227-399999 (Clockwise)

Preceding gene: 227826837

Following gene: 227826842

Centisome position: 15.26

GC content: 36.72

Gene sequence:

>1773_bases
ATGTTAAAAAAAGATAAAAAGTATAAGGCAATCTCAAGAGCTATAATTTCAATAATAATAGTAGTTATTATAGTTGCTAT
AGTCGGAGGGATAGGTGCATACTATTTAACTAGAGCACCTACATCATCTATTACCTCAACTTCATCAGTAAGCACATCTA
CTTCCTCATCAATACCAGTATCTACTTCTTCCTCATCTGCATCACAAGTAGTAGATTTTATAAATACTTTCGGTTCTGAA
GATCCGGTAGGATTAAAATATCTTCAAGGTAATTTTTCAATTTACTATCCAGGTTATATAATGCAATCTGAGGGACTTCC
AGGGGCTAGCGGTGTAGAAGTAAGATACGTAATAGTTAATGATATTGAAGCTGGAAAATTAGAAGGAGCTTTTTGGACTC
ATGCAGGCCCTGAAGTCTTATCATACGTAGAATTATTGCCTAATCCTCATGATTTATATAACTTAACCCCAGTATTGCAA
CAAGAAGGATTATTCAAAAATGGCGTAAGAAGTGCTCTACTTGCCATATCTTATAATGGTACAATATTCAGTTCCCCCAT
GAGTGTTGATAGGGGTGAGGAACTCTATTTTAATCCCAAGATTCTTAGGGAGTATAATTTGCCCATTCCCACGAATTTGA
GTATGCTGATTTACGATACTCAACAGTTGGAATCTCATGGTATAACTCCTTGGGCGGTTTCCGGTGCAGAGGGTGGTTAT
GAGCAACTACACCTATGGTTTGCAATCTTTCTATCAGTAGCATCACAATACTACGGCCCAGCAGGAGCAGCAAAACTATC
AAACCAACTAATGTACGGAGTACTAAACCTATACAACACAACAATCCAAAAAATCATAAACGAAACAGACAACATATTCG
TGCAATTCGTAAGCCCAGGAGCAGTAATCCCAAGCTGGCAAAGCCAATCCATATGGTCAGCACTGGCATTAGTAATAAAA
GGACAAGCAGCATTCGAAGCAGGAGGAAACTGGTTAGCCGGCTATGCTACTAATTGGTACAATACTACTACTTATCCAGC
AGCCTCTCCTTACTTAAATTGGACAAACATTAGCCTAATGGCCATGCCCTTTCCAGGAACACAAGGCATATACGTAATAG
ATGTAGATGCTATAGCAGTCCCTGCTTTAAATAATCCTCAGCTGCAAGCCGCAGTGAACTTTGTGAAATTTGTCGCATCA
TATAATGGAATGAAAATATGGACGTATCCTAGAGCTGTTTCCATTTGGGATAATGCTACTGACTATTATAAGACACCTAT
TCAGTGGTACGATTATCAAGATTTATTGCATACTGCTCCTCAAGACTTTACTTGGGCTTTTGCTGATGGTAGTCTGTTTG
ATGACGTTTTTTATTATTTAATTAGCCAAGAACTTAACTTACAAGAACAAGGTTTATCTTATATTCCAACATTTAATGCT
GCTTTACTAAAGGCCGAGAATATGACCTTCCATGAATGGCAATTGGCAGCTAAAGACGGGTTTGGATTTGTAGGTATAAG
AGGAGAACCGTTTGGTGACTATTTACCACCATGGGTGAATCCTTCTACATATACTTATAACTCAAGTTATATGCCTTTAT
TCTTAATACATCCACCTCACTATTTGCTACCATATTTAAAGGAGTTAAGTCAAGGGCAATATAAAGCTCAAAAAACAGAT
ACTGTTATCAATACAAATATATTGCCCTATTCAACTGTAATTCCAATGCTATTATATTTAGATGTTATTATTAAAAAATA
TAATATATTTTAG

Upstream 100 bases:

>100_bases
ATAAAGATATTTATATTGTTGATACTTCTTAACATAGCTACTTTATATGTAAAATACATGGAATATATAATAGTAGAACC
TAACAGAAGTTTGTGAGAAA

Downstream 100 bases:

>100_bases
ATAAATTAAAAATATTTTTTCATAAATCATTTTTAACTAGTTTTTAAGTTTGGTTCCTAATTTATATTTATAGATGGTTG
AGGACTAAGTGCCTACATTC

Product: arabinose ABC transporter arabinose binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MLKKDKKYKAISRAIISIIIVVIIVAIVGGIGAYYLTRAPTSSITSTSSVSTSTSSSIPVSTSSSSASQVVDFINTFGSE
DPVGLKYLQGNFSIYYPGYIMQSEGLPGASGVEVRYVIVNDIEAGKLEGAFWTHAGPEVLSYVELLPNPHDLYNLTPVLQ
QEGLFKNGVRSALLAISYNGTIFSSPMSVDRGEELYFNPKILREYNLPIPTNLSMLIYDTQQLESHGITPWAVSGAEGGY
EQLHLWFAIFLSVASQYYGPAGAAKLSNQLMYGVLNLYNTTIQKIINETDNIFVQFVSPGAVIPSWQSQSIWSALALVIK
GQAAFEAGGNWLAGYATNWYNTTTYPAASPYLNWTNISLMAMPFPGTQGIYVIDVDAIAVPALNNPQLQAAVNFVKFVAS
YNGMKIWTYPRAVSIWDNATDYYKTPIQWYDYQDLLHTAPQDFTWAFADGSLFDDVFYYLISQELNLQEQGLSYIPTFNA
ALLKAENMTFHEWQLAAKDGFGFVGIRGEPFGDYLPPWVNPSTYTYNSSYMPLFLIHPPHYLLPYLKELSQGQYKAQKTD
TVINTNILPYSTVIPMLLYLDVIIKKYNIF

Sequences:

>Translated_590_residues
MLKKDKKYKAISRAIISIIIVVIIVAIVGGIGAYYLTRAPTSSITSTSSVSTSTSSSIPVSTSSSSASQVVDFINTFGSE
DPVGLKYLQGNFSIYYPGYIMQSEGLPGASGVEVRYVIVNDIEAGKLEGAFWTHAGPEVLSYVELLPNPHDLYNLTPVLQ
QEGLFKNGVRSALLAISYNGTIFSSPMSVDRGEELYFNPKILREYNLPIPTNLSMLIYDTQQLESHGITPWAVSGAEGGY
EQLHLWFAIFLSVASQYYGPAGAAKLSNQLMYGVLNLYNTTIQKIINETDNIFVQFVSPGAVIPSWQSQSIWSALALVIK
GQAAFEAGGNWLAGYATNWYNTTTYPAASPYLNWTNISLMAMPFPGTQGIYVIDVDAIAVPALNNPQLQAAVNFVKFVAS
YNGMKIWTYPRAVSIWDNATDYYKTPIQWYDYQDLLHTAPQDFTWAFADGSLFDDVFYYLISQELNLQEQGLSYIPTFNA
ALLKAENMTFHEWQLAAKDGFGFVGIRGEPFGDYLPPWVNPSTYTYNSSYMPLFLIHPPHYLLPYLKELSQGQYKAQKTD
TVINTNILPYSTVIPMLLYLDVIIKKYNIF
>Mature_590_residues
MLKKDKKYKAISRAIISIIIVVIIVAIVGGIGAYYLTRAPTSSITSTSSVSTSTSSSIPVSTSSSSASQVVDFINTFGSE
DPVGLKYLQGNFSIYYPGYIMQSEGLPGASGVEVRYVIVNDIEAGKLEGAFWTHAGPEVLSYVELLPNPHDLYNLTPVLQ
QEGLFKNGVRSALLAISYNGTIFSSPMSVDRGEELYFNPKILREYNLPIPTNLSMLIYDTQQLESHGITPWAVSGAEGGY
EQLHLWFAIFLSVASQYYGPAGAAKLSNQLMYGVLNLYNTTIQKIINETDNIFVQFVSPGAVIPSWQSQSIWSALALVIK
GQAAFEAGGNWLAGYATNWYNTTTYPAASPYLNWTNISLMAMPFPGTQGIYVIDVDAIAVPALNNPQLQAAVNFVKFVAS
YNGMKIWTYPRAVSIWDNATDYYKTPIQWYDYQDLLHTAPQDFTWAFADGSLFDDVFYYLISQELNLQEQGLSYIPTFNA
ALLKAENMTFHEWQLAAKDGFGFVGIRGEPFGDYLPPWVNPSTYTYNSSYMPLFLIHPPHYLLPYLKELSQGQYKAQKTD
TVINTNILPYSTVIPMLLYLDVIIKKYNIF

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 65636; Mature: 65636

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKDKKYKAISRAIISIIIVVIIVAIVGGIGAYYLTRAPTSSITSTSSVSTSTSSSIPV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCE
STSSSSASQVVDFINTFGSEDPVGLKYLQGNFSIYYPGYIMQSEGLPGASGVEVRYVIVN
ECCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCEEEECCCCCCCCCCEEEEEEEE
DIEAGKLEGAFWTHAGPEVLSYVELLPNPHDLYNLTPVLQQEGLFKNGVRSALLAISYNG
CCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHCCCHHHHHCCCHHHHHHHEEEEEEECC
TIFSSPMSVDRGEELYFNPKILREYNLPIPTNLSMLIYDTQQLESHGITPWAVSGAEGGY
EEEECCCCCCCCCEEEECCHHHHEECCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCCH
EQLHLWFAIFLSVASQYYGPAGAAKLSNQLMYGVLNLYNTTIQKIINETDNIFVQFVSPG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
AVIPSWQSQSIWSALALVIKGQAAFEAGGNWLAGYATNWYNTTTYPAASPYLNWTNISLM
CCCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEE
AMPFPGTQGIYVIDVDAIAVPALNNPQLQAAVNFVKFVASYNGMKIWTYPRAVSIWDNAT
EECCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCC
DYYKTPIQWYDYQDLLHTAPQDFTWAFADGSLFDDVFYYLISQELNLQEQGLSYIPTFNA
CHHCCCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCE
ALLKAENMTFHEWQLAAKDGFGFVGIRGEPFGDYLPPWVNPSTYTYNSSYMPLFLIHPPH
EEEEECCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCH
YLLPYLKELSQGQYKAQKTDTVINTNILPYSTVIPMLLYLDVIIKKYNIF
HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKDKKYKAISRAIISIIIVVIIVAIVGGIGAYYLTRAPTSSITSTSSVSTSTSSSIPV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCE
STSSSSASQVVDFINTFGSEDPVGLKYLQGNFSIYYPGYIMQSEGLPGASGVEVRYVIVN
ECCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCEEEECCCCCCCCCCEEEEEEEE
DIEAGKLEGAFWTHAGPEVLSYVELLPNPHDLYNLTPVLQQEGLFKNGVRSALLAISYNG
CCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHCCCHHHHHCCCHHHHHHHEEEEEEECC
TIFSSPMSVDRGEELYFNPKILREYNLPIPTNLSMLIYDTQQLESHGITPWAVSGAEGGY
EEEECCCCCCCCCEEEECCHHHHEECCCCCCCCEEEEEEHHHHHHCCCCCEEECCCCCCH
EQLHLWFAIFLSVASQYYGPAGAAKLSNQLMYGVLNLYNTTIQKIINETDNIFVQFVSPG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
AVIPSWQSQSIWSALALVIKGQAAFEAGGNWLAGYATNWYNTTTYPAASPYLNWTNISLM
CCCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEE
AMPFPGTQGIYVIDVDAIAVPALNNPQLQAAVNFVKFVASYNGMKIWTYPRAVSIWDNAT
EECCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCC
DYYKTPIQWYDYQDLLHTAPQDFTWAFADGSLFDDVFYYLISQELNLQEQGLSYIPTFNA
CHHCCCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCE
ALLKAENMTFHEWQLAAKDGFGFVGIRGEPFGDYLPPWVNPSTYTYNSSYMPLFLIHPPH
EEEEECCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCH
YLLPYLKELSQGQYKAQKTDTVINTNILPYSTVIPMLLYLDVIIKKYNIF
HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]