| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
Click here to switch to the map view.
The map label for this gene is 227826837
Identifier: 227826837
GI number: 227826837
Start: 397604
End: 397933
Strand: Direct
Name: 227826837
Synonym: M1425_0458
Alternate gene names: NA
Gene position: 397604-397933 (Clockwise)
Preceding gene: 227826832
Following gene: 227826838
Centisome position: 15.24
GC content: 37.58
Gene sequence:
>330_bases GTGTCAAGCTGGGTTAAAAGAAAATTCGAACATTTAAGGAGGTGGAGAGAATACGCTGAGATTATCGCCAAAGCTTCAGA GGATATCGACCCTAATTCTAAAGCTTATGTATTTGGTGGTGTTGCAGAGAATAGGGTTACGGTTTTAAGCGATATTGACA TTCTGATTGTTTCTGAAGTAAAGGAGAGCTTTAAGTTTAAGTTAGAAGTATTTAAGAGGGCTTTTGATATTTATGGACTT CCCTTTGATGCCCCGGTCGAATTACATGTTACTTATAAGGAGGGGTTTAATGGCTACCTAAAGTATTCTAAGGTTATAGA GATAGCTTAG
Upstream 100 bases:
>100_bases GAAGCAGATATGGTGAGGAGGATCTGGAAGGAGGCATTTACAAATGATGCTATTAAAGTAGTCATTGAGTTAATTAACCT TCTGGAGGAGGTGGTTAAAA
Downstream 100 bases:
>100_bases GGATAGATGAATGATAAACAACCTATTTACTCTTAAAACTTATCGATTTCTCTTTCATATTAACTGTACTACTCAATCGA GTTAATAAGATTCTTACTAG
Product: DNA polymerase beta domain protein region
Products: NA
Alternate protein names: DNA Polymerase Beta Domain Protein Region; DNA Polymerase Beta Domain-Containing Protein
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSSWVKRKFEHLRRWREYAEIIAKASEDIDPNSKAYVFGGVAENRVTVLSDIDILIVSEVKESFKFKLEVFKRAFDIYGL PFDAPVELHVTYKEGFNGYLKYSKVIEIA
Sequences:
>Translated_109_residues MSSWVKRKFEHLRRWREYAEIIAKASEDIDPNSKAYVFGGVAENRVTVLSDIDILIVSEVKESFKFKLEVFKRAFDIYGL PFDAPVELHVTYKEGFNGYLKYSKVIEIA >Mature_108_residues SSWVKRKFEHLRRWREYAEIIAKASEDIDPNSKAYVFGGVAENRVTVLSDIDILIVSEVKESFKFKLEVFKRAFDIYGLP FDAPVELHVTYKEGFNGYLKYSKVIEIA
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12698; Mature: 12567
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSWVKRKFEHLRRWREYAEIIAKASEDIDPNSKAYVFGGVAENRVTVLSDIDILIVSEV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCEEEHHHH KESFKFKLEVFKRAFDIYGLPFDAPVELHVTYKEGFNGYLKYSKVIEIA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEHHEEEECC >Mature Secondary Structure SSWVKRKFEHLRRWREYAEIIAKASEDIDPNSKAYVFGGVAENRVTVLSDIDILIVSEV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCEEEHHHH KESFKFKLEVFKRAFDIYGLPFDAPVELHVTYKEGFNGYLKYSKVIEIA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA