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The map label for this gene is gpsA [H]

Identifier: 227815648

GI number: 227815648

Start: 2795601

End: 2796623

Strand: Reverse

Name: gpsA [H]

Synonym: BAMEG_3067

Alternate gene names: 227815648

Gene position: 2796623-2795601 (Counterclockwise)

Preceding gene: 227815649

Following gene: 227815647

Centisome position: 53.47

GC content: 40.66

Gene sequence:

>1023_bases
ATGACAAAAATCACAGTAGTTGGAGCAGGTAGCTGGGGAACAGCGTTAGCGATGGTATTAGCTGACAATGGGCATGATGT
ACGTATTTGGGGAAATCGTTCTGAACTTATGGATGAGATTAATACAAAACATGAGAATAGTCGATATCTCCCAGGAATTA
CATTGCCAAGCACAATCGTAGCCTACTCTTCTTTAGAAGAAGCATTAGTAGATGTAAATGTAGTACTTATTGTAGTACCA
ACGAAAGCGTATAGAGAAGTACTGCAAGATATGAAGAAATATGTAGCAGGCCCGACTACTTGGATTCATGCAAGTAAAGG
AATTGAACCTGGTACGTCAAAACGTATTTCGGAAGTGATTGAGGAAGAAATTCCAGAGGACTTGATTAAAGATGTTGTTG
TATTGTCTGGACCGAGTCATGCTGAAGAAGTAGGGTTGCGTCAAGCGACAACTGTTACGTCTGCAGCAAAGCGTATGGAA
GCGGCTGAGGAAGTACAAGATTTGTTTATGAATAGTTACTTCCGTGTATACACAAATCCAGATATCGTTGGAGTTGAACT
TGGTGGTGCGTTAAAAAATATTATCGCATTAGCTGCTGGGATAACTGATGGTCTTGGATTAGGTGATAATGCAAAAGCGG
CATTGATGACACGTGGTTTAACGGAGATTGCTCGTTTAGGAAGAAAAATGGGCGGAAATCCGTTAACGTTTGCTGGACTA
ACTGGTATGGGTGACTTAATTGTAACTTGTACAAGTGTTCATAGCCGAAATTGGCGCGCTGGAAATATGCTTGGAAAAGG
ACACTCTTTAGAAGAAGTGTTAGAAAGCATGGGTATGGTTGTCGAAGGTGTAAGAACAACGAAAGCTGCTCATGAATTGG
CAGAAAAAATGGAAGTAGAAATGCCGATTACAGCTGCTTTATATGATGTGCTATTCAATGGGAATAATGTAAAAGATGCA
GTAGGCTCATTAATGGGGCGTGTTCGAAAACACGAAGTGGAAGCTATACCTGACTTACTTTAA

Upstream 100 bases:

>100_bases
GCGCTTCTTAAAAAATCGTTTACGTGAATCATTCGGCTTTGTAGGAACGCCGATTCACATTATCGCTAGAGCAAGAGACT
AATGGAGAGGATGTGATTTT

Downstream 100 bases:

>100_bases
AGAAAAGCGACAGAAGTGCATTTGTACTTCTGTCGTTTTTTATTTTTTTTGGGTCTTTTCACCATTTTTTTATTTTTGCA
TAGGATGAAGAGTAACTTGA

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTKITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNVVLIVVP
TKAYREVLQDMKKYVAGPTTWIHASKGIEPGTSKRISEVIEEEIPEDLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRME
AAEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGNNVKDA
VGSLMGRVRKHEVEAIPDLL

Sequences:

>Translated_340_residues
MTKITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNVVLIVVP
TKAYREVLQDMKKYVAGPTTWIHASKGIEPGTSKRISEVIEEEIPEDLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRME
AAEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGNNVKDA
VGSLMGRVRKHEVEAIPDLL
>Mature_339_residues
TKITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNVVLIVVPT
KAYREVLQDMKKYVAGPTTWIHASKGIEPGTSKRISEVIEEEIPEDLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEA
AEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLT
GMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGNNVKDAV
GSLMGRVRKHEVEAIPDLL

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI24307999, Length=344, Percent_Identity=31.9767441860465, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI33695088, Length=346, Percent_Identity=29.7687861271676, Blast_Score=150, Evalue=2e-36,
Organism=Escherichia coli, GI1790037, Length=330, Percent_Identity=42.7272727272727, Blast_Score=280, Evalue=1e-76,
Organism=Caenorhabditis elegans, GI32564399, Length=331, Percent_Identity=33.5347432024169, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI193210136, Length=338, Percent_Identity=32.8402366863905, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI32564403, Length=338, Percent_Identity=32.8402366863905, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17507425, Length=341, Percent_Identity=31.3782991202346, Blast_Score=138, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI193210134, Length=331, Percent_Identity=29.9093655589124, Blast_Score=111, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6324513, Length=348, Percent_Identity=29.5977011494253, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6320181, Length=347, Percent_Identity=31.1239193083574, Blast_Score=146, Evalue=4e-36,
Organism=Drosophila melanogaster, GI17136200, Length=351, Percent_Identity=29.6296296296296, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI17136204, Length=351, Percent_Identity=29.6296296296296, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI17136202, Length=351, Percent_Identity=29.6296296296296, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI22026922, Length=334, Percent_Identity=26.0479041916168, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI45551945, Length=235, Percent_Identity=28.936170212766, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281362270, Length=235, Percent_Identity=28.936170212766, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24648969, Length=193, Percent_Identity=29.0155440414508, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 36594; Mature: 36462

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHENSRYLPGITLPSTIV
CCEEEEEECCCHHHHEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AYSSLEEALVDVNVVLIVVPTKAYREVLQDMKKYVAGPTTWIHASKGIEPGTSKRISEVI
HHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
EEEIPEDLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFMNSYFRVYTNP
HHHHHHHHHHHHEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
DIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
CEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVE
CCCCHHHHEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MPITAALYDVLFNGNNVKDAVGSLMGRVRKHEVEAIPDLL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHENSRYLPGITLPSTIV
CEEEEEECCCHHHHEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AYSSLEEALVDVNVVLIVVPTKAYREVLQDMKKYVAGPTTWIHASKGIEPGTSKRISEVI
HHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
EEEIPEDLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFMNSYFRVYTNP
HHHHHHHHHHHHEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
DIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
CEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVE
CCCCHHHHEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MPITAALYDVLFNGNNVKDAVGSLMGRVRKHEVEAIPDLL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA