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The map label for this gene is ytxD [H]

Identifier: 227815518

GI number: 227815518

Start: 2671469

End: 2672005

Strand: Reverse

Name: ytxD [H]

Synonym: BAMEG_2931

Alternate gene names: 227815518

Gene position: 2672005-2671469 (Counterclockwise)

Preceding gene: 227815519

Following gene: 227815517

Centisome position: 51.09

GC content: 35.57

Gene sequence:

>537_bases
TTGTTTGTTGATTTTTCGAAAAAGTCTAAAAAACACGGCCTACTTTCTTTAGAAGTTGATGGAGAGCAAGTAGACAACCC
TTTTATTCAAAAAGGAATTCGGTTAATGTTAAGTGGTTACGATGAAGAGGAATTAAAAGAAGTGTTAATGAAAGATGTTG
AAACGGAAGTGTATGAGTTAAGAAAAGGAGCGGCGTTATTAGATAAAATTGGTGATTTCGCTCCTGCTTGGGGTATGATA
GGGACTTTAATTGGTCTTATCATTATGCTTCAAAACTTGCAAGACACATCGCAAATTGGCACCGGGATGGCAGTTGCAAT
GTTAACGACATTGTATGGATCCGTACTTGCAAATATGATTGCAATCCCACTTGCTGAAAAAGTGTATAGAGGGATTGAGG
ATTTATATACAGAGAAGAAGTTTGTTATTGAAGCAATTTCAGAATTGTATCGTGGACAAATTCCGTCTAAATTAAAGTTG
AAACTGGATACGTATGTATACGAAACAAAGATAAAAAAAGTAAAACGAGCAGCCTAA

Upstream 100 bases:

>100_bases
AATTGTTGTGGCATATTGATTTGGAGAAATAAAAAAATATACGAAAAGTATTTTTACTGTTTTACATAGAAGAGAAGAAG
ATTTAGAACAGTTAACGGAT

Downstream 100 bases:

>100_bases
TATTGCAAGGAGTGGTATGGTGATGATAAAACGACCGCAAAAGGGATCGCCTCGTTGGATGACGACTTTTACAGATTTAA
CGATGTTATTATTAACTTTC

Product: flagellar motor protein MotP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMI
GTLIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKL
KLDTYVYETKIKKVKRAA

Sequences:

>Translated_178_residues
MFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMI
GTLIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKL
KLDTYVYETKIKKVKRAA
>Mature_178_residues
MFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMI
GTLIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKL
KLDTYVYETKIKKVKRAA

Specific function: May be involved in some transport function [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 19984; Mature: 19984

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYEL
CCCCCCCCHHHCCEEEEEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDTYVYETKIKKVKRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYEL
CCCCCCCCHHHCCEEEEEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDTYVYETKIKKVKRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]