Click here to switch to the map view.

The map label for this gene is ytxE [H]

Identifier: 227815517

GI number: 227815517

Start: 2670769

End: 2671446

Strand: Reverse

Name: ytxE [H]

Synonym: BAMEG_2930

Alternate gene names: 227815517

Gene position: 2671446-2670769 (Counterclockwise)

Preceding gene: 227815518

Following gene: 227815516

Centisome position: 51.08

GC content: 35.25

Gene sequence:

>678_bases
ATGATAAAACGACCGCAAAAGGGATCGCCTCGTTGGATGACGACTTTTACAGATTTAACGATGTTATTATTAACTTTCTT
TGTATTACTAGTTGCTACTTCAAAGCAGGATGCAGTAAAATTGTCAAAGATGCTTGAAAAGTTTAGTGATACGGAGCAAG
TAGATGCAAAAGTAATGGAAAATACAATACCAGATATTTCGCATGAAAAAAATGATGAAAAAATGATTTCGAAAAAAAGA
ATGGATGAATTATATAAGAAGTTAAAAGCATATGTAGATAATAACGGTATTAGTCAAGTGAATGTATATCGAGAGGATAC
GGGAGTAAGCGTCGTTATAGTAGATAATTTAATATTTGATACAGGTGACGCGAATGTTAAACCAGAAGCGAAAGAGATAA
TAAGTCAATTAGTTGGGTTTTTCCAATCGGTACCAAATCCCATTGTTGTAGAAGGACATACAGACAGTAGACCTATTCAT
AACGACAAATTCCCTTCAAACTGGGAATTATCTTCTGCGCGAGCAGCAAATATGATTCACCACTTAATCGAAGTGTATAA
TGTGGATGATAAAAGGCTAGCTGCGGTAGGATATGCAGACACAAAGCCAGTTGTACCAAATGATTCACCGCAAAATTGGG
AGAAAAACCGTCGCGTTGTCATTTATATAAAAGAATAG

Upstream 100 bases:

>100_bases
ATTCCGTCTAAATTAAAGTTGAAACTGGATACGTATGTATACGAAACAAAGATAAAAAAAGTAAAACGAGCAGCCTAATA
TTGCAAGGAGTGGTATGGTG

Downstream 100 bases:

>100_bases
TATATTATCATTTTAATAATAAAATAATAAAAATACGAAAATTCTTTTAAAAAAATATTAAATTTTATCATTTTATTTTG
TATAATGAGTGAGAATGATA

Product: flagellar motor protein MotS

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIKRPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTIPDISHEKNDEKMISKKR
MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIH
NDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVIYIKE

Sequences:

>Translated_225_residues
MIKRPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTIPDISHEKNDEKMISKKR
MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIH
NDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVIYIKE
>Mature_225_residues
MIKRPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVMENTIPDISHEKNDEKMISKKR
MDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIH
NDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVIYIKE

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 25668; Mature: 25668

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVME
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
NTIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFD
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECEEEE
TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
HLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVIYIKE
HHHHHHCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MIKRPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSKMLEKFSDTEQVDAKVME
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
NTIPDISHEKNDEKMISKKRMDELYKKLKAYVDNNGISQVNVYREDTGVSVVIVDNLIFD
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECEEEE
TGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSNWELSSARAANMIH
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
HLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVIYIKE
HHHHHHCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]