| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is glmM [H]
Identifier: 227080792
GI number: 227080792
Start: 600263
End: 601675
Strand: Reverse
Name: glmM [H]
Synonym: VCM66_0569
Alternate gene names: 227080792
Gene position: 601675-600263 (Counterclockwise)
Preceding gene: 227080793
Following gene: 227080780
Centisome position: 20.8
GC content: 49.19
Gene sequence:
>1413_bases ATGATTAAATTTGGTACTGGCGGCTGGCGTGCGTTTATTGGTGAAGAATTCACTAAAGATAATGTGCGCTTGGTGGCTCA AGCGTTAGCCAACATCATCCATCATGAACAAGCCGCAAACGAAGGCTTCGTAATTGGTTACGACCGCCGTTTTCTGTCAG ACAAAGCGGGACGCTGGTTTGCCGAAGTGTTAGCCGCGAATGGCGTTGTGGTGAGCTTTATCGACAAGTTTGTGCCAACA CCGGTGGTAATGTTTAAAGCCAAAGCGATGGATTGTGCTTACTCAGCCTGTATTACCGCCTCGCACAACCCGGCCGACTA CAACGGCATCAAAGTGTTTATTCGTGGTGGCCGTGATGCAGATGAAGTGATCACTCAGAAGATCGAGCAGCAAATTGCCA CACTGACTTTACAAGACGTGAAATCGATCGACTTTGATCAAGCCGTCAACGACAAACTGATCGACATCATCAACCCGATG AACGAGTTCGTCGACAGCATCATCAACTTCATCGATATTGAAGCGATCAAAAAAGCCAATCTGCGAGTGTTGATCGACCC GATGTTCGGGGTGGCGAAAAACGCGCTGCAAACGGTACTGATCAATGGCCGCTGCGACGTGGACGTGATCAACGATGGCA AAAACCCTGATTTCGGTGGTTTGATGCCTTCGCCTAGCGCTGCCACCTTGTATCGCTTGAAGCATCTGGTGAAACACGAA GGTTATGACATCGGTATCGGCACCGATGGCGATGCGGACCGCCTTGGCATCATCGATGAAAAAGGCAACTTTATTCACCC GAACGAAGTGCTGATCCTGCTTTACTACTACCTGCTGGAGTACAAAGGCTGGAAAGGTTCTGTGGTGCGTAACATCGCAA CCACACATCTGTTGGATAAGATCGCCGCCGATCATGGTGAGCGGTGCTTTGAAGTGCCTGTGGGCTTTAAACACATCTCT TCACAAATGGAAGCGGACGACTCTCTGATTGGCGGGGAGAGCTCTGGCGGCCTCACGATTCGTGGTCACATCAAGGGGAA AGATGGCGTGTTCGCTTCTAGCCTATTGGTGGAAATGATCAGCGTGACGGGCAAGAAACTCTCTGAGCTGTTAACCGAGA TCTATGATCGTTACGGCTATGCCTACACTGCGGAAGGCGATTGCAAATTTAAGCCCGCTCAGCGTGATGAGATCTACAAC AAGGTCTACATTGAGAAAAAACTGCCTGAGTTTGAATTCGACATCGATAAAGTCAGCTATGAAGATGGGGCGAAAGTCTA CTTCAAGAACGGTGGCTGGGTAATTGCCCGATTCTCCGGTACTGAACCTTTATTACGTATTTTCGCCGAAATGGCCGACA AAGATACTGCGGAGCGTGTTCTTCAACAGATGAAAGCTTTCTTGGCGTTGTAA
Upstream 100 bases:
>100_bases GTGCCCGTTTGCTAATACCTAAGCGTTTTATATGCCCAGACCACTTGTCGTTGCAACCAAGACTCTTGCAGCGTCAGTAG AAAAGGGATAGGGGGAGAAA
Downstream 100 bases:
>100_bases TCATCGCCTTGTCAAATCATCCCCTGAGGTTAAGTCCCCTCAGCGGAGAAGAACACTTGCCCGACGCTCGACGTCGGGCT TTTTTATGCAGGTAACATAG
Product: putative phosphoglucomutase/phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWFAEVLAANGVVVSFIDKFVPT PVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDADEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIDIINPM NEFVDSIINFIDIEAIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKIAADHGERCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYN KVYIEKKLPEFEFDIDKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL
Sequences:
>Translated_470_residues MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWFAEVLAANGVVVSFIDKFVPT PVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDADEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIDIINPM NEFVDSIINFIDIEAIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKIAADHGERCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYN KVYIEKKLPEFEFDIDKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL >Mature_470_residues MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWFAEVLAANGVVVSFIDKFVPT PVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDADEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIDIINPM NEFVDSIINFIDIEAIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKIAADHGERCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYN KVYIEKKLPEFEFDIDKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=499, Percent_Identity=25.4509018036072, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI290463102, Length=483, Percent_Identity=25.4658385093168, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI133922562, Length=514, Percent_Identity=23.7354085603113, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI31377548, Length=534, Percent_Identity=25.4681647940075, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI290463104, Length=322, Percent_Identity=25.776397515528, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1786904, Length=499, Percent_Identity=27.8557114228457, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1788361, Length=451, Percent_Identity=25.4988913525499, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1789566, Length=481, Percent_Identity=23.0769230769231, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17535441, Length=502, Percent_Identity=26.4940239043825, Blast_Score=129, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6323752, Length=504, Percent_Identity=26.1904761904762, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6322722, Length=537, Percent_Identity=26.0707635009311, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6323934, Length=407, Percent_Identity=24.5700245700246, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI17864244, Length=528, Percent_Identity=27.2727272727273, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI20129809, Length=525, Percent_Identity=24.952380952381, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24651977, Length=433, Percent_Identity=25.1732101616628, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24653722, Length=378, Percent_Identity=25.1322751322751, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 52284; Mature: 52284
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWF CCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH AEVLAANGVVVSFIDKFVPTPVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDA HHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCH DEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIDIINPMNEFVDSIINFIDIEAIKKAN HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE CEEEECCHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IAADHGERCFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCEEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYNKVYIEKKLPEFEFDIDKVSY HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL CCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWF CCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH AEVLAANGVVVSFIDKFVPTPVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDA HHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCH DEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIDIINPMNEFVDSIINFIDIEAIKKAN HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE CEEEECCHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IAADHGERCFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCEEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYNKVYIEKKLPEFEFDIDKVSY HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL CCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]