Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227080767

Identifier: 227080767

GI number: 227080767

Start: 570838

End: 570954

Strand: Reverse

Name: 227080767

Synonym: VCM66_0542

Alternate gene names: NA

Gene position: 570954-570838 (Counterclockwise)

Preceding gene: 227080769

Following gene: 227080766

Centisome position: 19.74

GC content: 43.59

Gene sequence:

>117_bases
TTGCTCAGAAATCATGACTTCAACTGTGTGTTTCATACCATTCTCGTTGTGTTGGGCGATGTCAGTATCGCTGACTTTGG
TGGCGCGTATAGTACCACTTCACTCAAATCCTGTTAA

Upstream 100 bases:

>100_bases
CAAAAGAACCACGCAGCAATCCAACCAAAACTAAATCACTACTCCCTTGATAATGCTCAGTGATCTGTTGACCTAATTCG
CGAATGCGCTGGGCGACCTC

Downstream 100 bases:

>100_bases
TCGTTTCCCTACTCATCCTCGCTTTGTTATGTACCCACTCAATAAAACAAGCTGAAACGACAAATAATTAACATAGTTGC
ACATTTTTCACCCAACAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MLRNHDFNCVFHTILVVLGDVSIADFGGAYSTTSLKSC

Sequences:

>Translated_38_residues
MLRNHDFNCVFHTILVVLGDVSIADFGGAYSTTSLKSC
>Mature_38_residues
MLRNHDFNCVFHTILVVLGDVSIADFGGAYSTTSLKSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4133; Mature: 4133

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNHDFNCVFHTILVVLGDVSIADFGGAYSTTSLKSC
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRNHDFNCVFHTILVVLGDVSIADFGGAYSTTSLKSC
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA