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The map label for this gene is sprT [H]

Identifier: 227080681

GI number: 227080681

Start: 484329

End: 484817

Strand: Reverse

Name: sprT [H]

Synonym: VCM66_0456

Alternate gene names: 227080681

Gene position: 484817-484329 (Counterclockwise)

Preceding gene: 227080682

Following gene: 227080680

Centisome position: 16.76

GC content: 50.92

Gene sequence:

>489_bases
ATGGTTCGTTTTGATCTGCACTGCCAAGCTGAGCAGAAAATCAAACAATGTATCGCTACCGCCAGCGAGGCTTTGCAACG
CCCCTTTAAACTGCCCAAACTCAATTACCGTTTACGTGGACGCGCCGCCGGCAAGGCCTATTTGCAGCTGGGGGAAATCC
GCCTTAATCCGGTGCTGTTTGCCGAAAACGTCGATGACTTCCTCCAGCAAGTGATCCCACACGAAATCGCCCATCTGATT
ACGTATCAGCTTTATGGTCGAGTACGTCCACACGGCGTCGAATGGCAACAAGTGATGAGCCAAGTCTTTAAGCTTGAGCC
GAAAACCACTCACACCTTTTCTGTCACTTCAGTACAGGGCAAAACCTTCCACTACCGCTGTGCGTGTCGTGAATACCCGC
TCACCATTCGTCGCCACAATAAAGTGCTGCGTGGTGAAGCTACCTATCGCTGCCAAAGCTGCCAACAAAACTTGATCTAC
CAAGCCTAA

Upstream 100 bases:

>100_bases
GACAAACGGCGAGGATTGCAATAGAGTTCAAGGCCCTTTCTCATGAAAGGGTCTTTTTTATGAGTTCGATGATAGGGTAT
TTAGAGGTAGAAATTCGCTA

Downstream 100 bases:

>100_bases
CCTTTGATTGGCTGAGACCACTTCTATAGGCTTTGCCTTGCTCTCGCTAAAAACTAACAAAAGCATCAACGACAAAGGCA
ATTTATGAGTGTTAAACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVRFDLHCQAEQKIKQCIATASEALQRPFKLPKLNYRLRGRAAGKAYLQLGEIRLNPVLFAENVDDFLQQVIPHEIAHLI
TYQLYGRVRPHGVEWQQVMSQVFKLEPKTTHTFSVTSVQGKTFHYRCACREYPLTIRRHNKVLRGEATYRCQSCQQNLIY
QA

Sequences:

>Translated_162_residues
MVRFDLHCQAEQKIKQCIATASEALQRPFKLPKLNYRLRGRAAGKAYLQLGEIRLNPVLFAENVDDFLQQVIPHEIAHLI
TYQLYGRVRPHGVEWQQVMSQVFKLEPKTTHTFSVTSVQGKTFHYRCACREYPLTIRRHNKVLRGEATYRCQSCQQNLIY
QA
>Mature_162_residues
MVRFDLHCQAEQKIKQCIATASEALQRPFKLPKLNYRLRGRAAGKAYLQLGEIRLNPVLFAENVDDFLQQVIPHEIAHLI
TYQLYGRVRPHGVEWQQVMSQVFKLEPKTTHTFSVTSVQGKTFHYRCACREYPLTIRRHNKVLRGEATYRCQSCQQNLIY
QA

Specific function: Involved In Bola Gene Expression At The Stationary Phase. [C]

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family [H]

Homologues:

Organism=Escherichia coli, GI1789313, Length=148, Percent_Identity=47.2972972972973, Blast_Score=157, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006640 [H]

Pfam domain/function: PF10263 SprT-like [H]

EC number: NA

Molecular weight: Translated: 18933; Mature: 18933

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRFDLHCQAEQKIKQCIATASEALQRPFKLPKLNYRLRGRAAGKAYLQLGEIRLNPVLF
CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHEEECCEEECEEEE
AENVDDFLQQVIPHEIAHLITYQLYGRVRPHGVEWQQVMSQVFKLEPKTTHTFSVTSVQG
ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECC
KTFHYRCACREYPLTIRRHNKVLRGEATYRCQSCQQNLIYQA
CEEEEEEECCCCCEEEECCCEEECCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVRFDLHCQAEQKIKQCIATASEALQRPFKLPKLNYRLRGRAAGKAYLQLGEIRLNPVLF
CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHEEECCEEECEEEE
AENVDDFLQQVIPHEIAHLITYQLYGRVRPHGVEWQQVMSQVFKLEPKTTHTFSVTSVQG
ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECC
KTFHYRCACREYPLTIRRHNKVLRGEATYRCQSCQQNLIYQA
CEEEEEEECCCCCEEEECCCEEECCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA