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The map label for this gene is arcA

Identifier: 227080634

GI number: 227080634

Start: 437667

End: 438890

Strand: Reverse

Name: arcA

Synonym: VCM66_0408

Alternate gene names: 227080634

Gene position: 438890-437667 (Counterclockwise)

Preceding gene: 227080637

Following gene: 227080607

Centisome position: 15.17

GC content: 50.82

Gene sequence:

>1224_bases
ATGAATCGTTTGTATGTGGGCTCTGAAGTGGGGCAACTGCGCCGTGTATTGCTAAATCGTCCGGAGCGGGCACTCACCCA
TTTAACCCCCTCTAACTGCCATGAACTCTTGTTTGATGATGTACTGGCCGTTGAAGCGGCGGGCGTTGAGCACGATGCCT
TTGCCAATACGTTGCGCACGCAAGATGTGGAAGTGTTACTGCTGCACGATTTACTCGAAGAGACACTCGCCATTCCTGAA
GCCAGACAGTGGCTACTGAACACTCAGATCAGCGATTTTCGCTTTGGTCCAACCTTTGCTCGCGAGCTGCGCCACGCTCT
TAACCATCTTGATGATCATCATCTCACCACGCTTTTACTGGGCGGGCTCGCTTTTTCTGAATTGCACCTCGAATCGGATT
CCATGCTACCGAAAATGCGCCAGCCACTCGATTTTGTGATTGAGCCGCTGCCCAATCACCTGTTTACTCGTGATACCTCC
TGCTGGGTGTATGGAGGGGTGTCACTCAATCCAATGATGAAACCGGCTCGCCAGCGTGAAACCAACCATTTGCGCGCGAT
TTATCGCTGGCACCCGATTTTTGCCCAGCATCCTTTTATCCACTATTTCGGTATTGATGATCTGCACTACGACAACGCCA
ATATAGAGGGTGGTGATGTGCTGGTGATCGGCAAAGGCGCGGTGTTGATTGGAATGTCTGAACGCACTTCACCACAAGGA
GTGGAAAATTTAGCGGCCGCACTCTTTAAACATGGTCAAGCCAGCAAAGTGATTGCGATCAACCTGCCCAAACATCGCTC
GTGCATGCATTTAGATACGGTGATGACTCATATGGATGTGGATACTTTTTCCGTTTATCCAGAGGTCATGCGTAAAGATC
TGCCGACTTGGCGACTCACCCCCAAGGGCAATAACGGCGATATGCGCGTTGAGCAAGTCCCCAGCTATTTACACGCCATT
GAGCAAGCACTTGGGGTCGATTATTTGAAAATCATCACCACAGGTGGCAACAGTTACGAAGCCGAACGCGAGCAGTGGAA
TGACGCCAATAATGTCCTCACTGTCAAACCTGGGGTAGTGATTGGCTACGAACGCAACGTTTATACCAATGAGAAATACG
ATAAAGCAGGCATTAAGGTACTGACCATTCCCGGCAATGAGCTAGGACGAGGCCGCGGCGGCGCACGCTGTATGAGCTGC
CCAATTGAGCGTGACGGGATTTAA

Upstream 100 bases:

>100_bases
GGTGAACGAACGTAGCCAACACCGCTGCAAATAGGAAAGGGATAAGCCATCGCTACCTACACATCGCAATGGGTGGCACA
AAAGAGAGGAAGGAAACCCG

Downstream 100 bases:

>100_bases
ACTCTCAACGCAAAACCACCGCGAATGGCGGTGGTTTTGTGTCGTAGTGTCTATTGTCAGACTAACGGTTAGGCCAACGA
ACCAGCAAAATTCGGTTACT

Product: arginine deiminase

Products: NA

Alternate protein names: ADI; Arginine dihydrolase; AD

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MNRLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGVEHDAFANTLRTQDVEVLLLHDLLEETLAIPE
ARQWLLNTQISDFRFGPTFARELRHALNHLDDHHLTTLLLGGLAFSELHLESDSMLPKMRQPLDFVIEPLPNHLFTRDTS
CWVYGGVSLNPMMKPARQRETNHLRAIYRWHPIFAQHPFIHYFGIDDLHYDNANIEGGDVLVIGKGAVLIGMSERTSPQG
VENLAAALFKHGQASKVIAINLPKHRSCMHLDTVMTHMDVDTFSVYPEVMRKDLPTWRLTPKGNNGDMRVEQVPSYLHAI
EQALGVDYLKIITTGGNSYEAEREQWNDANNVLTVKPGVVIGYERNVYTNEKYDKAGIKVLTIPGNELGRGRGGARCMSC
PIERDGI

Sequences:

>Translated_407_residues
MNRLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGVEHDAFANTLRTQDVEVLLLHDLLEETLAIPE
ARQWLLNTQISDFRFGPTFARELRHALNHLDDHHLTTLLLGGLAFSELHLESDSMLPKMRQPLDFVIEPLPNHLFTRDTS
CWVYGGVSLNPMMKPARQRETNHLRAIYRWHPIFAQHPFIHYFGIDDLHYDNANIEGGDVLVIGKGAVLIGMSERTSPQG
VENLAAALFKHGQASKVIAINLPKHRSCMHLDTVMTHMDVDTFSVYPEVMRKDLPTWRLTPKGNNGDMRVEQVPSYLHAI
EQALGVDYLKIITTGGNSYEAEREQWNDANNVLTVKPGVVIGYERNVYTNEKYDKAGIKVLTIPGNELGRGRGGARCMSC
PIERDGI
>Mature_407_residues
MNRLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGVEHDAFANTLRTQDVEVLLLHDLLEETLAIPE
ARQWLLNTQISDFRFGPTFARELRHALNHLDDHHLTTLLLGGLAFSELHLESDSMLPKMRQPLDFVIEPLPNHLFTRDTS
CWVYGGVSLNPMMKPARQRETNHLRAIYRWHPIFAQHPFIHYFGIDDLHYDNANIEGGDVLVIGKGAVLIGMSERTSPQG
VENLAAALFKHGQASKVIAINLPKHRSCMHLDTVMTHMDVDTFSVYPEVMRKDLPTWRLTPKGNNGDMRVEQVPSYLHAI
EQALGVDYLKIITTGGNSYEAEREQWNDANNVLTVKPGVVIGYERNVYTNEKYDKAGIKVLTIPGNELGRGRGGARCMSC
PIERDGI

Specific function: Unknown

COG id: COG2235

COG function: function code E; Arginine deiminase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginine deiminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARCA_VIBC3 (A5F8P7)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- ProteinModelPortal:   A5F8P7
- SMR:   A5F8P7
- STRING:   A5F8P7
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A2842
- eggNOG:   COG2235
- HOGENOM:   HBG298398
- OMA:   HDLLVET
- ProtClustDB:   PRK01388
- BioCyc:   VCHO345073:VC0395_A2842-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00242
- InterPro:   IPR003198
- InterPro:   IPR003876
- PIRSF:   PIRSF006356
- PRINTS:   PR01466
- TIGRFAMs:   TIGR01078

Pfam domain/function: PF02274 Amidinotransf

EC number: =3.5.3.6

Molecular weight: Translated: 45905; Mature: 45905

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: ACT_SITE 397-397

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGVEHDAFANTLRT
CCCEECCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
QDVEVLLLHDLLEETLAIPEARQWLLNTQISDFRFGPTFARELRHALNHLDDHHLTTLLL
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
GGLAFSELHLESDSMLPKMRQPLDFVIEPLPNHLFTRDTSCWVYGGVSLNPMMKPARQRE
HHHHHHHEECCCCCCCHHHHCCHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHCCHHHHH
TNHLRAIYRWHPIFAQHPFIHYFGIDDLHYDNANIEGGDVLVIGKGAVLIGMSERTSPQG
HHHHEEHEEECCHHHCCCEEEEECCCCEECCCCCCCCCCEEEEECCEEEEEECCCCCCCH
VENLAAALFKHGQASKVIAINLPKHRSCMHLDTVMTHMDVDTFSVYPEVMRKDLPTWRLT
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE
PKGNNGDMRVEQVPSYLHAIEQALGVDYLKIITTGGNSYEAEREQWNDANNVLTVKPGVV
ECCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCEE
IGYERNVYTNEKYDKAGIKVLTIPGNELGRGRGGARCMSCPIERDGI
EEECCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MNRLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGVEHDAFANTLRT
CCCEECCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
QDVEVLLLHDLLEETLAIPEARQWLLNTQISDFRFGPTFARELRHALNHLDDHHLTTLLL
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
GGLAFSELHLESDSMLPKMRQPLDFVIEPLPNHLFTRDTSCWVYGGVSLNPMMKPARQRE
HHHHHHHEECCCCCCCHHHHCCHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHCCHHHHH
TNHLRAIYRWHPIFAQHPFIHYFGIDDLHYDNANIEGGDVLVIGKGAVLIGMSERTSPQG
HHHHEEHEEECCHHHCCCEEEEECCCCEECCCCCCCCCCEEEEECCEEEEEECCCCCCCH
VENLAAALFKHGQASKVIAINLPKHRSCMHLDTVMTHMDVDTFSVYPEVMRKDLPTWRLT
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE
PKGNNGDMRVEQVPSYLHAIEQALGVDYLKIITTGGNSYEAEREQWNDANNVLTVKPGVV
ECCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCEE
IGYERNVYTNEKYDKAGIKVLTIPGNELGRGRGGARCMSCPIERDGI
EEECCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA