Click here to switch to the map view.

The map label for this gene is slyX

Identifier: 227080564

GI number: 227080564

Start: 358967

End: 359185

Strand: Reverse

Name: slyX

Synonym: VCM66_0336

Alternate gene names: 227080564

Gene position: 359185-358967 (Counterclockwise)

Preceding gene: 227080565

Following gene: 227080554

Centisome position: 12.42

GC content: 44.75

Gene sequence:

>219_bases
ATGTCGCTAACCCAACTTCAAGAGCGCATTGAAGATTTAGAGTGCAAATTAGCTTTTCAAGAGCAAACCATCGAAACTCT
TAATGATGCATTAACCCAGCAGCAACTGCTGCTCAGTAAGATGCAAGATCAGATGAAATACGTGGTCGGTAAAGTCAAAA
ATATGGACACTTCCACTCTAGCGGATCCTGCGCACGAAACGCCGCCTCCACACTACTGA

Upstream 100 bases:

>100_bases
TCGTGTATGATGCGGCTTTTGACGCCCAACAGCGCGCCGTAGCGGGCAGCTCTGCGGGTATCGCTCAAGCTTGGCGAATG
GAGAACTGAAAATGCAAGAG

Downstream 100 bases:

>100_bases
TGGAATCATTTTCCACTGGAAGCCTACGTAATTCGCGATCTTAACGAGCGAAAACGTAGGCTATCACCGCACCAGCCACC
ACCAAACAACCGCCGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSLTQLQERIEDLECKLAFQEQTIETLNDALTQQQLLLSKMQDQMKYVVGKVKNMDTSTLADPAHETPPPHY

Sequences:

>Translated_72_residues
MSLTQLQERIEDLECKLAFQEQTIETLNDALTQQQLLLSKMQDQMKYVVGKVKNMDTSTLADPAHETPPPHY
>Mature_71_residues
SLTQLQERIEDLECKLAFQEQTIETLNDALTQQQLLLSKMQDQMKYVVGKVKNMDTSTLADPAHETPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family

Homologues:

Organism=Escherichia coli, GI1789747, Length=67, Percent_Identity=43.2835820895522, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SLYX_VIBC3 (A5F3M2)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- STRING:   A5F3M2
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A2763
- eggNOG:   COG2900
- HOGENOM:   HBG700945
- OMA:   IAELEMK
- ProtClustDB:   PRK04406
- BioCyc:   VCHO345073:VC0395_A2763-MONOMER
- HAMAP:   MF_00715
- InterPro:   IPR007236

Pfam domain/function: PF04102 SlyX

EC number: NA

Molecular weight: Translated: 8277; Mature: 8145

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTQLQERIEDLECKLAFQEQTIETLNDALTQQQLLLSKMQDQMKYVVGKVKNMDTSTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ADPAHETPPPHY
CCCCCCCCCCCC
>Mature Secondary Structure 
SLTQLQERIEDLECKLAFQEQTIETLNDALTQQQLLLSKMQDQMKYVVGKVKNMDTSTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ADPAHETPPPHY
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA