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The map label for this gene is rsgA [H]

Identifier: 227080552

GI number: 227080552

Start: 344700

End: 345761

Strand: Reverse

Name: rsgA [H]

Synonym: VCM66_0324

Alternate gene names: 227080552

Gene position: 345761-344700 (Counterclockwise)

Preceding gene: 227080554

Following gene: 227080551

Centisome position: 11.95

GC content: 48.49

Gene sequence:

>1062_bases
GTGACAAAAAAGAAAAAGCTTACACACGGTCAAGTACGCCGGGTTAGAAATAACCAACATAAAAAACTCAAACAAGAAGA
GTCTATCGTTTGGGATGAGGCCTTGCTCGGCAGTGCGCAACCGGGATTAGTGATTACCCGCTTTGGTCAACATGCCGATA
TTGAAGATCCAGTGACGGGGGAAATTCATCGCTGTAACCTGCGTCGCGGCATCGAAAGTTTAGTATCCGGCGATAACGTC
CTGTGGCGCCCTGGGGCCGAGACTCTCGCAGGCATTTCCGGTGTGGTAGAAGCGGTGGAAGCTCGCAGCTCTGTATTAGT
GCGCCCAGATTATTACGATGGCCTCAAACCCGTTGCGGCAAACGTGGATCAAATGGTGATCGTGTCGTCGGTATTACCCG
AGCTCTCTCTGAATATTATTGATCGCTACTTGATTGCTTCTGAAACCTTAGGGATTGCACCACTCATCGTACTGAACAAG
ATTGACCTACTCAGCCCAGAGCTTCGAGAGCAATACAGCACATGGTTAAATGATTACCGTGCCATTGGCTATGACGTACT
CTACGTCAGTAAGAAAACCGGTGAAGGGATTGCGGATCTTGAAGTGAAACTGCGCGATCGCACCAACGTGTTTGTGGGTC
AATCGGGTGTTGGCAAATCCAGTTTGGTCAATGCATTACTTCCAGAATTGGAAGAAGATGTGGAAGAAGGGGCGATTTCT
GAAACGTCTGGCTTAGGCCAACACACCACTACCGCCGCACGGCTTTATCACATTCCAAGTGGAGGTGATTTGATTGACTC
ACCCGGGGTACGTGAATTTGGTTTGTGGCACTTAGAAACCGATGATGTCACCAAAGCTTATGTCGAATTTCGCCCTTACT
TAGGCGGCTGTAAATTTCGTGATTGCAAACATGGGGATGACCCGGGTTGCTTGTTGCGTGAGGCCGTAAGCAAGGGAGAA
ATCAGCGCACTGCGTTTTGATAATTATCATCGAATTGTGCAAAGCATGACGGAAAACAAAGCCAATCGGCAGTATTCGCG
CAGCAAAAAAGCCGATCTGTAA

Upstream 100 bases:

>100_bases
ATTCACAAAAGAGGTACTATACCCAAATTCAGATCCACAGGATACGTATCAAATTGAGATTTGATACGCCTTATATCTAG
CAGAGAGTAAGTAGAACACT

Downstream 100 bases:

>100_bases
GAGCAAATTGTTAGCAAGTTTAGAGCATCTACTGACAGAAGGCGCGATTTTCAGTAACATCTCGCGCCCATCACCACTCT
ATTGGAATGTAAACCATGGA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTKKKKLTHGQVRRVRNNQHKKLKQEESIVWDEALLGSAQPGLVITRFGQHADIEDPVTGEIHRCNLRRGIESLVSGDNV
LWRPGAETLAGISGVVEAVEARSSVLVRPDYYDGLKPVAANVDQMVIVSSVLPELSLNIIDRYLIASETLGIAPLIVLNK
IDLLSPELREQYSTWLNDYRAIGYDVLYVSKKTGEGIADLEVKLRDRTNVFVGQSGVGKSSLVNALLPELEEDVEEGAIS
ETSGLGQHTTTAARLYHIPSGGDLIDSPGVREFGLWHLETDDVTKAYVEFRPYLGGCKFRDCKHGDDPGCLLREAVSKGE
ISALRFDNYHRIVQSMTENKANRQYSRSKKADL

Sequences:

>Translated_353_residues
MTKKKKLTHGQVRRVRNNQHKKLKQEESIVWDEALLGSAQPGLVITRFGQHADIEDPVTGEIHRCNLRRGIESLVSGDNV
LWRPGAETLAGISGVVEAVEARSSVLVRPDYYDGLKPVAANVDQMVIVSSVLPELSLNIIDRYLIASETLGIAPLIVLNK
IDLLSPELREQYSTWLNDYRAIGYDVLYVSKKTGEGIADLEVKLRDRTNVFVGQSGVGKSSLVNALLPELEEDVEEGAIS
ETSGLGQHTTTAARLYHIPSGGDLIDSPGVREFGLWHLETDDVTKAYVEFRPYLGGCKFRDCKHGDDPGCLLREAVSKGE
ISALRFDNYHRIVQSMTENKANRQYSRSKKADL
>Mature_352_residues
TKKKKLTHGQVRRVRNNQHKKLKQEESIVWDEALLGSAQPGLVITRFGQHADIEDPVTGEIHRCNLRRGIESLVSGDNVL
WRPGAETLAGISGVVEAVEARSSVLVRPDYYDGLKPVAANVDQMVIVSSVLPELSLNIIDRYLIASETLGIAPLIVLNKI
DLLSPELREQYSTWLNDYRAIGYDVLYVSKKTGEGIADLEVKLRDRTNVFVGQSGVGKSSLVNALLPELEEDVEEGAISE
TSGLGQHTTTAARLYHIPSGGDLIDSPGVREFGLWHLETDDVTKAYVEFRPYLGGCKFRDCKHGDDPGCLLREAVSKGEI
SALRFDNYHRIVQSMTENKANRQYSRSKKADL

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=346, Percent_Identity=58.0924855491329, Blast_Score=410, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39152; Mature: 39021

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKKKLTHGQVRRVRNNQHKKLKQEESIVWDEALLGSAQPGLVITRFGQHADIEDPVTG
CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
EIHRCNLRRGIESLVSGDNVLWRPGAETLAGISGVVEAVEARSSVLVRPDYYDGLKPVAA
CHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEECCCHHCCCCHHHC
NVDQMVIVSSVLPELSLNIIDRYLIASETLGIAPLIVLNKIDLLSPELREQYSTWLNDYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AIGYDVLYVSKKTGEGIADLEVKLRDRTNVFVGQSGVGKSSLVNALLPELEEDVEEGAIS
HCCEEEEEEECCCCCCEEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
ETSGLGQHTTTAARLYHIPSGGDLIDSPGVREFGLWHLETDDVTKAYVEFRPYLGGCKFR
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCEEEECCHHHHHHHHHHHHCCCCCCCC
DCKHGDDPGCLLREAVSKGEISALRFDNYHRIVQSMTENKANRQYSRSKKADL
CCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKKKKLTHGQVRRVRNNQHKKLKQEESIVWDEALLGSAQPGLVITRFGQHADIEDPVTG
CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
EIHRCNLRRGIESLVSGDNVLWRPGAETLAGISGVVEAVEARSSVLVRPDYYDGLKPVAA
CHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEECCCHHCCCCHHHC
NVDQMVIVSSVLPELSLNIIDRYLIASETLGIAPLIVLNKIDLLSPELREQYSTWLNDYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AIGYDVLYVSKKTGEGIADLEVKLRDRTNVFVGQSGVGKSSLVNALLPELEEDVEEGAIS
HCCEEEEEEECCCCCCEEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
ETSGLGQHTTTAARLYHIPSGGDLIDSPGVREFGLWHLETDDVTKAYVEFRPYLGGCKFR
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCEEEECCHHHHHHHHHHHHCCCCCCCC
DCKHGDDPGCLLREAVSKGEISALRFDNYHRIVQSMTENKANRQYSRSKKADL
CCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]