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The map label for this gene is 227080444

Identifier: 227080444

GI number: 227080444

Start: 215965

End: 216744

Strand: Reverse

Name: 227080444

Synonym: VCM66_0212

Alternate gene names: NA

Gene position: 216744-215965 (Counterclockwise)

Preceding gene: 227080445

Following gene: 227080442

Centisome position: 7.49

GC content: 49.1

Gene sequence:

>780_bases
GTGAGTAAACCAACGCTTGCTGTCGCATTGATAGTAAAAAATGAAGCGCGTCATCTGGATGAGTGCTTACAAACCGTGCA
CGACTGGGTTGATGAGATCGTAGTGCTCGATTCTGGCAGTCACGATGAAACCGAGCAGGTCGCGCGTCGTTACACTGAAA
AATTTTACGTGAATGCAAAGTGGCCGGGCTTTGGCCTGCAGCGCCAATTGGCACAATCTTATGTCCAATCGGATTATGTG
CTGTGGCTGGATGCCGATGAGCGAGTGACTCCGGAGCTCAAGCAGAGCATTTTGCAAGCCGTTGCTGCCAATAAGCCGGA
TACCTTGTATCAATTTGCACGCCTCAGTTGGGTGTTTGGTCGCTTTATCCGCCATAGCGGTTGGTACCCTGATCGCGTAC
TGCGCCTCTATCCAACTCAACTGACTCGCTACAATGACGCATTAGTGCATGAAAAGGTGCACGTTGAACCAAGCATGAAA
GTCGAAACTTTAGCGGGCGATGCGATTCACTACACCTATAACGATGTGCATCACTATCTGGTGAAATCCGCGGGTTACGC
CAAAGCGTGGGCGGATCAACGTCAAGCGAAAGGCAAGAAGGCTTCCCTTTCTCAAGGCATCGTCCATGCTGTGGGCTGTT
TTCTGAAAATGTATCTGCTCAAGCGCGGTTTTTTAGATGGAAAACAGGGATTTTTAATTGCACTGCTCTCTGCACACTCT
ACCTTTGTAAAATACGCAGACTTGTGGGCACGTGATAATGACGAGCACTACAAACGCTAA

Upstream 100 bases:

>100_bases
GATTGCGATGTTTGAGCGTGCCGCTGCTGACATCATGGCCACACAGGTGAACGATTGATACACCTTTTATACCCAGATTT
ATTCGTAACGAGGATTTTTC

Downstream 100 bases:

>100_bases
GTCGATATCTATCGAGTAAAGTAACAAAGACAAAGGGAGCCGCAGCTCCCTTTTTTAATGATTAAAGCTGCACACTACGC
AGCCAAGGCGCAAGCTCAGT

Product: putative lipopolysaccharide biosynthesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSKPTLAVALIVKNEARHLDECLQTVHDWVDEIVVLDSGSHDETEQVARRYTEKFYVNAKWPGFGLQRQLAQSYVQSDYV
LWLDADERVTPELKQSILQAVAANKPDTLYQFARLSWVFGRFIRHSGWYPDRVLRLYPTQLTRYNDALVHEKVHVEPSMK
VETLAGDAIHYTYNDVHHYLVKSAGYAKAWADQRQAKGKKASLSQGIVHAVGCFLKMYLLKRGFLDGKQGFLIALLSAHS
TFVKYADLWARDNDEHYKR

Sequences:

>Translated_259_residues
MSKPTLAVALIVKNEARHLDECLQTVHDWVDEIVVLDSGSHDETEQVARRYTEKFYVNAKWPGFGLQRQLAQSYVQSDYV
LWLDADERVTPELKQSILQAVAANKPDTLYQFARLSWVFGRFIRHSGWYPDRVLRLYPTQLTRYNDALVHEKVHVEPSMK
VETLAGDAIHYTYNDVHHYLVKSAGYAKAWADQRQAKGKKASLSQGIVHAVGCFLKMYLLKRGFLDGKQGFLIALLSAHS
TFVKYADLWARDNDEHYKR
>Mature_258_residues
SKPTLAVALIVKNEARHLDECLQTVHDWVDEIVVLDSGSHDETEQVARRYTEKFYVNAKWPGFGLQRQLAQSYVQSDYVL
WLDADERVTPELKQSILQAVAANKPDTLYQFARLSWVFGRFIRHSGWYPDRVLRLYPTQLTRYNDALVHEKVHVEPSMKV
ETLAGDAIHYTYNDVHHYLVKSAGYAKAWADQRQAKGKKASLSQGIVHAVGCFLKMYLLKRGFLDGKQGFLIALLSAHST
FVKYADLWARDNDEHYKR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 29859; Mature: 29728

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPTLAVALIVKNEARHLDECLQTVHDWVDEIVVLDSGSHDETEQVARRYTEKFYVNAK
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHEEEECC
WPGFGLQRQLAQSYVQSDYVLWLDADERVTPELKQSILQAVAANKPDTLYQFARLSWVFG
CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RFIRHSGWYPDRVLRLYPTQLTRYNDALVHEKVHVEPSMKVETLAGDAIHYTYNDVHHYL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEHHHHHHHHH
VKSAGYAKAWADQRQAKGKKASLSQGIVHAVGCFLKMYLLKRGFLDGKQGFLIALLSAHS
HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TFVKYADLWARDNDEHYKR
HHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
SKPTLAVALIVKNEARHLDECLQTVHDWVDEIVVLDSGSHDETEQVARRYTEKFYVNAK
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHEEEECC
WPGFGLQRQLAQSYVQSDYVLWLDADERVTPELKQSILQAVAANKPDTLYQFARLSWVFG
CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RFIRHSGWYPDRVLRLYPTQLTRYNDALVHEKVHVEPSMKVETLAGDAIHYTYNDVHHYL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEEHHHHHHHHH
VKSAGYAKAWADQRQAKGKKASLSQGIVHAVGCFLKMYLLKRGFLDGKQGFLIALLSAHS
HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TFVKYADLWARDNDEHYKR
HHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]