| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is fhuC [H]
Identifier: 227080423
GI number: 227080423
Start: 195488
End: 196447
Strand: Direct
Name: fhuC [H]
Synonym: VCM66_0190
Alternate gene names: 227080423
Gene position: 195488-196447 (Clockwise)
Preceding gene: 227080422
Following gene: 227080424
Centisome position: 6.76
GC content: 52.71
Gene sequence:
>960_bases ATGTGCTTGATGAGTTTATGGAATGTTCGTTTACGGAACATTTGCCAACCGAAGGCGGTTTTTGGCTGGCTTGCCGCGCT TTGCCTATTCGCACTGCCCGTGCAAGCACAAATTGTGCTGACGGATAGCCAAGGTACGCACACTTTTGCTGAGGTTCCAC AGCGAGTGGTGGTACTGAACTGGGATCTGCTTGAACAAGTGCTTGAACTGGGCATTCAACCCGTCGGCGCGCCAGAATTG AGTTCTTACGTGCAGTGGGTTGTGCAACCCGAGGTGCCAAGTTCGGTGCAAGATATTGGAACCCGTACTGAGCCGAATTT AGAGAAAATCGCTGCGCTCAAACCGGATTTCATTTTAGCCGCAGGGCCGCAACAAGATTTGCTGGCCACCTTAGGGCGCA TTGCGCCAGTGGTGTATTTGCCCAACTTTGCTGAGCAAGATAACGCTGCCCAAGTGGCGATTTCCCACTTTAAAACCTTA GCTACTTTGTTTGGTAAAGAGGCGGTGGCGCAGCAAAAACTGGAGGCGATGTATGCCCGTTTTGCTGAGCTGAAAGCTTC GCTACAGCACGCCTTTGGTGACACTTTACCTGCGGTGGTGACGCTGCGTTTTGCCAACCCAACCTCGGTGTTTTTGTATA CCGAAAACTCCACGCCGCAATATGTGCTAGAACAGCTCGGTTTATCGTCAGCGCTGCCGCAGCCGCCGAAAGAGTGGGGC ATAGTGCAAAAACGCTTGAGTGAGTTGCAACACGTTGAGCAAGGCTATGTGCTCTATTTCTTGCCGTTTGCGGAAGAGAA AAAAGTGCAAAAATCGGTGCTGTGGCGAGCGATGCCGTTTGTGCAAGCGGGGCGTGTCAATTCCGTGCGTTCCGTGTGGA GCTATGGCGGGGCGATGTCACTGCGTTATAGCGCAGAAGCGATCACCGAAAGCTTGCTGGCGGTGGCTCCGCAATCATGA
Upstream 100 bases:
>100_bases TCGATGAACAGCGGCTGTCCGAGTTGTATCACTCACCGATTCGTTTGATCGATCACCCGAATCCCATTTCCCACTCCTCT ACTAATAAGGTTGCGATCGT
Downstream 100 bases:
>100_bases GTGTGCTGCGTTTAACTGGTTTGGGGGCGCTGACTCTGCTGTTGGCGCTGGTGAGTGTGCAGTGGGGGCACAATTTAACT CTCAATGAGCAGTGGCAATT
Product: iron(III) ABC transporter, periplasmic iron-compound-binding protein
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein D; Ferrichrome-binding periplasmic protein; Iron(III)-hydroxamate-binding protein fhuD [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MCLMSLWNVRLRNICQPKAVFGWLAALCLFALPVQAQIVLTDSQGTHTFAEVPQRVVVLNWDLLEQVLELGIQPVGAPEL SSYVQWVVQPEVPSSVQDIGTRTEPNLEKIAALKPDFILAAGPQQDLLATLGRIAPVVYLPNFAEQDNAAQVAISHFKTL ATLFGKEAVAQQKLEAMYARFAELKASLQHAFGDTLPAVVTLRFANPTSVFLYTENSTPQYVLEQLGLSSALPQPPKEWG IVQKRLSELQHVEQGYVLYFLPFAEEKKVQKSVLWRAMPFVQAGRVNSVRSVWSYGGAMSLRYSAEAITESLLAVAPQS
Sequences:
>Translated_319_residues MCLMSLWNVRLRNICQPKAVFGWLAALCLFALPVQAQIVLTDSQGTHTFAEVPQRVVVLNWDLLEQVLELGIQPVGAPEL SSYVQWVVQPEVPSSVQDIGTRTEPNLEKIAALKPDFILAAGPQQDLLATLGRIAPVVYLPNFAEQDNAAQVAISHFKTL ATLFGKEAVAQQKLEAMYARFAELKASLQHAFGDTLPAVVTLRFANPTSVFLYTENSTPQYVLEQLGLSSALPQPPKEWG IVQKRLSELQHVEQGYVLYFLPFAEEKKVQKSVLWRAMPFVQAGRVNSVRSVWSYGGAMSLRYSAEAITESLLAVAPQS >Mature_319_residues MCLMSLWNVRLRNICQPKAVFGWLAALCLFALPVQAQIVLTDSQGTHTFAEVPQRVVVLNWDLLEQVLELGIQPVGAPEL SSYVQWVVQPEVPSSVQDIGTRTEPNLEKIAALKPDFILAAGPQQDLLATLGRIAPVVYLPNFAEQDNAAQVAISHFKTL ATLFGKEAVAQQKLEAMYARFAELKASLQHAFGDTLPAVVTLRFANPTSVFLYTENSTPQYVLEQLGLSSALPQPPKEWG IVQKRLSELQHVEQGYVLYFLPFAEEKKVQKSVLWRAMPFVQAGRVNSVRSVWSYGGAMSLRYSAEAITESLLAVAPQS
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Binds the iron(3+)-hydroxamate complex and transfers it to the membrane-bound permease. Required for the transport of all iron(3+)-hydroxamate siderophores such as ferrich
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786346, Length=261, Percent_Identity=31.4176245210728, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI87082411, Length=261, Percent_Identity=28.3524904214559, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008091 - InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 35264; Mature: 35264
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLMSLWNVRLRNICQPKAVFGWLAALCLFALPVQAQIVLTDSQGTHTFAEVPQRVVVLN CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCEEEEEC WDLLEQVLELGIQPVGAPELSSYVQWVVQPEVPSSVQDIGTRTEPNLEKIAALKPDFILA HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHCCCCEEEE AGPQQDLLATLGRIAPVVYLPNFAEQDNAAQVAISHFKTLATLFGKEAVAQQKLEAMYAR CCCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAELKASLQHAFGDTLPAVVTLRFANPTSVFLYTENSTPQYVLEQLGLSSALPQPPKEWG HHHHHHHHHHHHCCCCCHHEEEEECCCCEEEEEECCCCHHHHHHHHCHHHCCCCCCHHHH IVQKRLSELQHVEQGYVLYFLPFAEEKKVQKSVLWRAMPFVQAGRVNSVRSVWSYGGAMS HHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEE LRYSAEAITESLLAVAPQS EEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MCLMSLWNVRLRNICQPKAVFGWLAALCLFALPVQAQIVLTDSQGTHTFAEVPQRVVVLN CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCEEEEEC WDLLEQVLELGIQPVGAPELSSYVQWVVQPEVPSSVQDIGTRTEPNLEKIAALKPDFILA HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHCCCCEEEE AGPQQDLLATLGRIAPVVYLPNFAEQDNAAQVAISHFKTLATLFGKEAVAQQKLEAMYAR CCCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAELKASLQHAFGDTLPAVVTLRFANPTSVFLYTENSTPQYVLEQLGLSSALPQPPKEWG HHHHHHHHHHHHCCCCCHHEEEEECCCCEEEEEECCCCHHHHHHHHCHHHCCCCCCHHHH IVQKRLSELQHVEQGYVLYFLPFAEEKKVQKSVLWRAMPFVQAGRVNSVRSVWSYGGAMS HHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEE LRYSAEAITESLLAVAPQS EEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301821; 2823072; 8202364; 9278503; 7651325; 10742172 [H]