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The map label for this gene is 227080379

Identifier: 227080379

GI number: 227080379

Start: 135175

End: 135804

Strand: Direct

Name: 227080379

Synonym: VCM66_0144

Alternate gene names: NA

Gene position: 135175-135804 (Clockwise)

Preceding gene: 227080378

Following gene: 227080382

Centisome position: 4.67

GC content: 48.57

Gene sequence:

>630_bases
ATGAGCATGTTGAGCTGGATTTCTGTCGTGTTGTCGGGGTTTATCAGCATTTCTGCTTATGAAAATCAGAAGCTTAAGCA
AGCGATATTCTTTCGAATCTTCAGCCTCCTGTTACTGACAATTATTGTGTGGGAGCAGCACAGTCATGCCACGCCAGAGG
TGATTTTTATCTCTCTTGGTTTGGCGGTGTCGATGTTTGCGCATGGACTGCGGCTAAATCATCGCTACCACAAAGCCAGC
TTTGTGCTGTTTTTAGTCGCGCAACTGCTGTTTAGTAAAGCATTCTGGGTGCAATTGTCGGGGAGTATGGTGTGGTGGTT
GCCCGCATTACTGGTGGCGGCAAGCATAGTGGCGTTTTTTTTGTTACTGCCACAAATTGATACCTTAATCTTCCCGGTCA
CCATTATGGGGTTGATGTTAGTACAGATGACGTGGGCTGCGGGTGAACTGTGGCTACAAGAGGCCACCGTGGCTTCTGGC
GCTGGTTTCTTAGGATGTCTGGTTTATATCCTCTCGGCCACGTTATTAGCCATCCACGATTATCGGCGTCCACTTCCTTG
GGGGCACACTCTTATCTCCAGCTCCTACTTGATAGCCCAAGCCTTGATCTCAGCGTCGATCGTGTTTTAG

Upstream 100 bases:

>100_bases
CAGCTCAAGTAAGGATTCGCTAGCAAGATCCAACTTTTTACTTTCATAACTGGACATCAAAAGTCAGATCCCTACACTGG
CGGCAGTTTGAGTTAGGGGT

Downstream 100 bases:

>100_bases
TCATATTCACGGTCTATGATGTAAAAAAACCGCCTCGCGGCGGTTTTTTTACATCATGTATTTACGGCGAATATCCAACA
GGGCAAAAATGCCAAAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSMLSWISVVLSGFISISAYENQKLKQAIFFRIFSLLLLTIIVWEQHSHATPEVIFISLGLAVSMFAHGLRLNHRYHKAS
FVLFLVAQLLFSKAFWVQLSGSMVWWLPALLVAASIVAFFLLLPQIDTLIFPVTIMGLMLVQMTWAAGELWLQEATVASG
AGFLGCLVYILSATLLAIHDYRRPLPWGHTLISSSYLIAQALISASIVF

Sequences:

>Translated_209_residues
MSMLSWISVVLSGFISISAYENQKLKQAIFFRIFSLLLLTIIVWEQHSHATPEVIFISLGLAVSMFAHGLRLNHRYHKAS
FVLFLVAQLLFSKAFWVQLSGSMVWWLPALLVAASIVAFFLLLPQIDTLIFPVTIMGLMLVQMTWAAGELWLQEATVASG
AGFLGCLVYILSATLLAIHDYRRPLPWGHTLISSSYLIAQALISASIVF
>Mature_208_residues
SMLSWISVVLSGFISISAYENQKLKQAIFFRIFSLLLLTIIVWEQHSHATPEVIFISLGLAVSMFAHGLRLNHRYHKASF
VLFLVAQLLFSKAFWVQLSGSMVWWLPALLVAASIVAFFLLLPQIDTLIFPVTIMGLMLVQMTWAAGELWLQEATVASGA
GFLGCLVYILSATLLAIHDYRRPLPWGHTLISSSYLIAQALISASIVF

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23315; Mature: 23184

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLSWISVVLSGFISISAYENQKLKQAIFFRIFSLLLLTIIVWEQHSHATPEVIFISLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LAVSMFAHGLRLNHRYHKASFVLFLVAQLLFSKAFWVQLSGSMVWWLPALLVAASIVAFF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLLPQIDTLIFPVTIMGLMLVQMTWAAGELWLQEATVASGAGFLGCLVYILSATLLAIHD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YRRPLPWGHTLISSSYLIAQALISASIVF
HCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SMLSWISVVLSGFISISAYENQKLKQAIFFRIFSLLLLTIIVWEQHSHATPEVIFISLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LAVSMFAHGLRLNHRYHKASFVLFLVAQLLFSKAFWVQLSGSMVWWLPALLVAASIVAFF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLLPQIDTLIFPVTIMGLMLVQMTWAAGELWLQEATVASGAGFLGCLVYILSATLLAIHD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YRRPLPWGHTLISSSYLIAQALISASIVF
HCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA