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The map label for this gene is yigA [H]

Identifier: 227080363

GI number: 227080363

Start: 121303

End: 122001

Strand: Direct

Name: yigA [H]

Synonym: VCM66_0127

Alternate gene names: 227080363

Gene position: 121303-122001 (Clockwise)

Preceding gene: 227080362

Following gene: 227080364

Centisome position: 4.19

GC content: 52.5

Gene sequence:

>699_bases
TTGTCTCAGGTAACGGCGGATGCTCTGACTGCCCAAGTGGTGGCAGAGTATCTTTATGAACATCCCGATTTTTTTCAGCA
TCATCCTCATCTGGTCGAACGTTTAGCCTTACCGACCCAAACGGGCGCGGTATCGCTCGCTCATGTGCAGTTAGCGCGTC
AGCGCCAGCGGATAGACTCTCTCGAAGAGGAGATCACCGCCTTGATGTCGCTCGCGGCAAATAACGATCGTACTTTCCAT
GAGTTTATGGATCTGCAAGAGCAGATTCTAAAATGCTCGTCGCTGCAAGCGGTGTTACACGCGATTGAAGCCAAAGCGCG
TGAACTCAATCTGCGTGCTTACGTGCGCCTGCTGCAGCGTCATGATGAAAAATACGGTTTAGCCAGTGAGGATTGGCAGC
GCTTTGCGACCAATCATTTTAATGGCAAATCGGCTTATTTAGGTCGCTTACGCCAAGCGGATCGGCAACGTCTGCTGGGG
GATAGGCCCGCGCCAGAAATGGGTTCGTATGTGGTGTTACCTTTGCAGCGCCAAGCGCCGTTGGGAATTTTGGCCTTCGC
CAGTGAAGATGGCGGCCACTTTCAGCCGAGTATGGATACCTTGTTTTTGCGCCATCTGGCGTTAGTCTTAGCTCATCTGA
TCGAGACATTACCTTGGCAGTCACACGATGAAGAACGACGAACGCACCCCGCTTCCTGA

Upstream 100 bases:

>100_bases
CTGGAAATCCACTGGCAAGGCCCCGGCAAACCGCTGTATATGACAGGCCCGGCTACTCATATCTACGATGGCCAAATCTC
TTGCTAATTGAGGTTCAATT

Downstream 100 bases:

>100_bases
TGCGTTGGCTCAACCGCTGGAGCGTTTTTACGCCTACCTGCATACGGAAAAAGGGTTGAGCCTGTATACCCAGCGCAATT
ATAAGCAGCAGTTGGAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSQVTADALTAQVVAEYLYEHPDFFQHHPHLVERLALPTQTGAVSLAHVQLARQRQRIDSLEEEITALMSLAANNDRTFH
EFMDLQEQILKCSSLQAVLHAIEAKARELNLRAYVRLLQRHDEKYGLASEDWQRFATNHFNGKSAYLGRLRQADRQRLLG
DRPAPEMGSYVVLPLQRQAPLGILAFASEDGGHFQPSMDTLFLRHLALVLAHLIETLPWQSHDEERRTHPAS

Sequences:

>Translated_232_residues
MSQVTADALTAQVVAEYLYEHPDFFQHHPHLVERLALPTQTGAVSLAHVQLARQRQRIDSLEEEITALMSLAANNDRTFH
EFMDLQEQILKCSSLQAVLHAIEAKARELNLRAYVRLLQRHDEKYGLASEDWQRFATNHFNGKSAYLGRLRQADRQRLLG
DRPAPEMGSYVVLPLQRQAPLGILAFASEDGGHFQPSMDTLFLRHLALVLAHLIETLPWQSHDEERRTHPAS
>Mature_231_residues
SQVTADALTAQVVAEYLYEHPDFFQHHPHLVERLALPTQTGAVSLAHVQLARQRQRIDSLEEEITALMSLAANNDRTFHE
FMDLQEQILKCSSLQAVLHAIEAKARELNLRAYVRLLQRHDEKYGLASEDWQRFATNHFNGKSAYLGRLRQADRQRLLGD
RPAPEMGSYVVLPLQRQAPLGILAFASEDGGHFQPSMDTLFLRHLALVLAHLIETLPWQSHDEERRTHPAS

Specific function: Unknown

COG id: COG3159

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790243, Length=223, Percent_Identity=29.5964125560538, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007435 [H]

Pfam domain/function: PF04340 DUF484 [H]

EC number: NA

Molecular weight: Translated: 26470; Mature: 26339

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVTADALTAQVVAEYLYEHPDFFQHHPHLVERLALPTQTGAVSLAHVQLARQRQRIDS
CCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LEEEITALMSLAANNDRTFHEFMDLQEQILKCSSLQAVLHAIEAKARELNLRAYVRLLQR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDEKYGLASEDWQRFATNHFNGKSAYLGRLRQADRQRLLGDRPAPEMGSYVVLPLQRQAP
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
LGILAFASEDGGHFQPSMDTLFLRHLALVLAHLIETLPWQSHDEERRTHPAS
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
SQVTADALTAQVVAEYLYEHPDFFQHHPHLVERLALPTQTGAVSLAHVQLARQRQRIDS
CCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LEEEITALMSLAANNDRTFHEFMDLQEQILKCSSLQAVLHAIEAKARELNLRAYVRLLQR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDEKYGLASEDWQRFATNHFNGKSAYLGRLRQADRQRLLGDRPAPEMGSYVVLPLQRQAP
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
LGILAFASEDGGHFQPSMDTLFLRHLALVLAHLIETLPWQSHDEERRTHPAS
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]