| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is crcB
Identifier: 227080296
GI number: 227080296
Start: 59321
End: 59701
Strand: Direct
Name: crcB
Synonym: VCM66_0060
Alternate gene names: 227080296
Gene position: 59321-59701 (Clockwise)
Preceding gene: 227080294
Following gene: 227080297
Centisome position: 2.05
GC content: 43.31
Gene sequence:
>381_bases ATGTCATTCGCGATATTGGGTTTTATTGCTTTAGGCGGCGCGGTTGGTGCTTGCGCTCGTTTCTTAGTGTCCGAAATATG CGTCACTTTATTTGGGCGTGGTTTCCCGATTGGAACACTGACCGTTAATGTGGTGGGGTCATTTATTATGGGGGTTTTGA TCGCTTGTGTTGAAAATGAGTGGTTAAGCCCTTACCCATGGAAACAAGTGATTGGCCTTGGTTTTCTCGGAGCATTAACG ACTTTCTCGACGTTTTCTATGGATAACGTGCTTTTAATGCAGCAGGGCGCTTTTTTTAAAATGGGGGCGAATGTACTGTT GAATGTCATTTTAAGTATTTCTGCTGCGTGGATTGGTTTTCACTGGTTAATGAAAAGTTGA
Upstream 100 bases:
>100_bases CCACATTGTTTTTGCTCAATCTATTATTTCGTTGAAGTTTTGCGCTTTATACCGAGGAGTGTTTAGAATACCCTCTTAGT TGGTAGATAAAGGAATCGGC
Downstream 100 bases:
>100_bases TCAATGAAACAGCCATTTTACTTGGTTAACGAATAAGCTTTATCTATAATGCTTCCACTTGTCGGAGTGCCATTGGGCTG AGACCGTTTATTCGGGATCC
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSFAILGFIALGGAVGACARFLVSEICVTLFGRGFPIGTLTVNVVGSFIMGVLIACVENEWLSPYPWKQVIGLGFLGALT TFSTFSMDNVLLMQQGAFFKMGANVLLNVILSISAAWIGFHWLMKS
Sequences:
>Translated_126_residues MSFAILGFIALGGAVGACARFLVSEICVTLFGRGFPIGTLTVNVVGSFIMGVLIACVENEWLSPYPWKQVIGLGFLGALT TFSTFSMDNVLLMQQGAFFKMGANVLLNVILSISAAWIGFHWLMKS >Mature_125_residues SFAILGFIALGGAVGACARFLVSEICVTLFGRGFPIGTLTVNVVGSFIMGVLIACVENEWLSPYPWKQVIGLGFLGALTT FSTFSMDNVLLMQQGAFFKMGANVLLNVILSISAAWIGFHWLMKS
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=116, Percent_Identity=37.9310344827586, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_VIBC3 (A5F4D3)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - STRING: A5F4D3 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A2453 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: LISELCV - ProtClustDB: PRK14200 - BioCyc: VCHO345073:VC0395_A2453-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13531; Mature: 13400
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x245eaa54)-; HASH(0x243d6b8c)-; HASH(0x245fb7d4)-; HASH(0x2447656c)-;
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAILGFIALGGAVGACARFLVSEICVTLFGRGFPIGTLTVNVVGSFIMGVLIACVENE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC WLSPYPWKQVIGLGFLGALTTFSTFSMDNVLLMQQGAFFKMGANVLLNVILSISAAWIGF CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH HWLMKS HHHHCH >Mature Secondary Structure SFAILGFIALGGAVGACARFLVSEICVTLFGRGFPIGTLTVNVVGSFIMGVLIACVENE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC WLSPYPWKQVIGLGFLGALTTFSTFSMDNVLLMQQGAFFKMGANVLLNVILSISAAWIGF CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH HWLMKS HHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA