Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227080290

Identifier: 227080290

GI number: 227080290

Start: 49960

End: 50085

Strand: Direct

Name: 227080290

Synonym: VCM66_0053

Alternate gene names: NA

Gene position: 49960-50085 (Clockwise)

Preceding gene: 227080287

Following gene: 227080291

Centisome position: 1.73

GC content: 42.86

Gene sequence:

>126_bases
GTGTTATTTATCGGACAAGCAAGCCCGTTTGCGGCGCATTATACGGGGATTTTTTTCTCAAGCAAACGTTTGCTTTTTCT
GGTTGATGAGAAGAACTGGTCAATTGCTCCACGATTTGTACACTGA

Upstream 100 bases:

>100_bases
GCCACACCAAACTGGTCAAGCATTTCTGCTGCGTGTTTCATGGTTGGCCAGTCTGACTTGGAACCCATGATAATACCGAC
TGTCATCTCAAACTCCTTCA

Downstream 100 bases:

>100_bases
GCACAAATGAAAGAGGAGTGGCTCTCGTGGAGAATCTACAACAGGCGGTGGATGCGCTACGCAAAGGTTGCGTTATTGCC
TATCCAACCGAAGGGGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MLFIGQASPFAAHYTGIFFSSKRLLFLVDEKNWSIAPRFVH

Sequences:

>Translated_41_residues
MLFIGQASPFAAHYTGIFFSSKRLLFLVDEKNWSIAPRFVH
>Mature_41_residues
MLFIGQASPFAAHYTGIFFSSKRLLFLVDEKNWSIAPRFVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4744; Mature: 4744

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIGQASPFAAHYTGIFFSSKRLLFLVDEKNWSIAPRFVH
CEEECCCCCCCEEEEEEEECCCEEEEEEECCCCEECCEECC
>Mature Secondary Structure
MLFIGQASPFAAHYTGIFFSSKRLLFLVDEKNWSIAPRFVH
CEEECCCCCCCEEEEEEEECCCEEEEEEECCCCEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA