| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080262
Identifier: 227080262
GI number: 227080262
Start: 21656
End: 21856
Strand: Direct
Name: 227080262
Synonym: VCM66_0025
Alternate gene names: NA
Gene position: 21656-21856 (Clockwise)
Preceding gene: 227080260
Following gene: 227080269
Centisome position: 0.75
GC content: 46.27
Gene sequence:
>201_bases TTGAGCGAGGGAATGATGTTAACCACACTCGATAGACTGACCATCTATGCCGTTTTGTGTTTTATTTCCTTGTGTGCTTT GGGCTTGGGAGAGACCACACAAGCTCAATTGATGCCAGTGTTAGGTACTGCTGCCTCCATCTTTGGTATTTGGCTAGAGA TGCGTAGCGAACAAGACACCACTCAGCAACCACATCGTTAA
Upstream 100 bases:
>100_bases ACAATTAAGGCGTAGATGATACTGGTGGAGAAAAATTATTCAATAATCGCTTGGCAAAAGGATCATTTTGTTATAACTTC CTTAACAAGTTAGTAACAAG
Downstream 100 bases:
>100_bases CCAACGTGACTGACTACGCTCAATTACATTCCGACACTATCCCCATTTTTCTTGGGCTTCCCCGCTGAAAGGCGGGATTT TTTTGCCTGCTATTTATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MSEGMMLTTLDRLTIYAVLCFISLCALGLGETTQAQLMPVLGTAASIFGIWLEMRSEQDTTQQPHR
Sequences:
>Translated_66_residues MSEGMMLTTLDRLTIYAVLCFISLCALGLGETTQAQLMPVLGTAASIFGIWLEMRSEQDTTQQPHR >Mature_65_residues SEGMMLTTLDRLTIYAVLCFISLCALGLGETTQAQLMPVLGTAASIFGIWLEMRSEQDTTQQPHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7292; Mature: 7160
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGMMLTTLDRLTIYAVLCFISLCALGLGETTQAQLMPVLGTAASIFGIWLEMRSEQDT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TQQPHR CCCCCC >Mature Secondary Structure SEGMMLTTLDRLTIYAVLCFISLCALGLGETTQAQLMPVLGTAASIFGIWLEMRSEQDT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TQQPHR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA