Click here to switch to the map view.

The map label for this gene is ytfP [H]

Identifier: 226951065

GI number: 226951065

Start: 4123221

End: 4124450

Strand: Direct

Name: ytfP [H]

Synonym: CLM_4118

Alternate gene names: 226951065

Gene position: 4123221-4124450 (Clockwise)

Preceding gene: 226951062

Following gene: 226951085

Centisome position: 99.23

GC content: 27.32

Gene sequence:

>1230_bases
GTGTATCATGAAATAATAATTTTAGGTGGAGGTGCTTCTGGAATTACAGCATCTATAATATCAAAAGATATGGGAACAGA
TGTGGCCATATTAGAAAGTAATGATAGAATAGGTAAAAAAATTTTAACTACTGGTAATGGTAGATGTAACATAAGTAATG
AAAACATATCTTCTTGTAAATATTACAGTAATAATAATAATTTTTATAAATTTATTTTGTCACAATTTACAGTGCAGGAT
ACAAAAAATTTTTTTAATAGCTTAGGTCTTCCATTAATCACTCTTAATGAAGGTAAAATATATCCCATGTCCCTACAAGC
TTCTTCTGTGCTAGACATACTAAGATTAGCTATAGAAGATAGGCAAATCCCTATTTATTTTAATAATAAGGTTAAAAATA
TAAAAAAATCTAATAAAAGATTTGTAATTTCTACTGAAAATGAAATTTTTCAATGCAAAAAATTGATACTAGCTTCTGGT
GGAATGTCCGCTCCTAATACTGGCTCTGATGGTTCAGGATTTAAACTTGCAAAAAATTTTGGTCATAATATTATTGATCC
GGTGCCTGGATTAGTTCAACTTAAATTAGATTTTCCTTATCTAAAAGCTTTATCTGGAATTAAATTTGATGGAAATGTAA
AACTTACACTAGATAATAAAAATTTACGAGAGGAATCTGGAGAAATACTATTTACTGATTATGGAATATCTGGTCCTCCT
ATTCTACAATTAAGTAGTTTAGTCTCTAGACTTTTATATAATAATAAAAAAATTTATTTAGAAATTGACATGTTTCCTAA
TATGAGTAAAGAAAATATAATAAATTTATTAGAAAATCATTGGGGAACTTTTTACTACAGAACTATTCATGATTCTTTTA
TTGGAATAATAAATAAGAAATTAATACCTACTCTTTTAAAATATTGTGGTATAAAAAATATTCATATGCCTTGTCAGGAT
ATAACGTGGCAAGAAAAAGAAAGAATATTTCATGCATTAAAAAATTGGATTTTTACAATAGCTGGAACTAACTCCTTTAA
AAATTCTCAAGTAACTTGTGGAGGTGTAGATACTTCTGAGGTTTCAAATAAAAGCTTAGAATCTTTGAAAGTTAAAGATC
TTTATTTTTGTGGAGAAATTTTAGATGTAAATGGAGACTGTGGAGGTTTTAACTTACAGTGGGCTTGGTCTTCTGGGTAT
ATAGCTGGTAAAAATGCTTCTTCAAAATAA

Upstream 100 bases:

>100_bases
TTTGTTATACTTATATATAATTATAACATTTTCCCAATACTAATTATATTTATTAATTAAAAGTTTACTAAATTATCTAA
AAATTAAGGAGAGATTTATT

Downstream 100 bases:

>100_bases
AAAAATAAATTGCTAGAAATGCTTCTAAATTAATTTTTTCAATTAGGAAACACTTTCTAGCAATTTATAAATATCTCCTT
TATTTTTCATAATAAAAATA

Product: pyridine nucleotide-disulfide oxidoreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MYHEIIILGGGASGITASIISKDMGTDVAILESNDRIGKKILTTGNGRCNISNENISSCKYYSNNNNFYKFILSQFTVQD
TKNFFNSLGLPLITLNEGKIYPMSLQASSVLDILRLAIEDRQIPIYFNNKVKNIKKSNKRFVISTENEIFQCKKLILASG
GMSAPNTGSDGSGFKLAKNFGHNIIDPVPGLVQLKLDFPYLKALSGIKFDGNVKLTLDNKNLREESGEILFTDYGISGPP
ILQLSSLVSRLLYNNKKIYLEIDMFPNMSKENIINLLENHWGTFYYRTIHDSFIGIINKKLIPTLLKYCGIKNIHMPCQD
ITWQEKERIFHALKNWIFTIAGTNSFKNSQVTCGGVDTSEVSNKSLESLKVKDLYFCGEILDVNGDCGGFNLQWAWSSGY
IAGKNASSK

Sequences:

>Translated_409_residues
MYHEIIILGGGASGITASIISKDMGTDVAILESNDRIGKKILTTGNGRCNISNENISSCKYYSNNNNFYKFILSQFTVQD
TKNFFNSLGLPLITLNEGKIYPMSLQASSVLDILRLAIEDRQIPIYFNNKVKNIKKSNKRFVISTENEIFQCKKLILASG
GMSAPNTGSDGSGFKLAKNFGHNIIDPVPGLVQLKLDFPYLKALSGIKFDGNVKLTLDNKNLREESGEILFTDYGISGPP
ILQLSSLVSRLLYNNKKIYLEIDMFPNMSKENIINLLENHWGTFYYRTIHDSFIGIINKKLIPTLLKYCGIKNIHMPCQD
ITWQEKERIFHALKNWIFTIAGTNSFKNSQVTCGGVDTSEVSNKSLESLKVKDLYFCGEILDVNGDCGGFNLQWAWSSGY
IAGKNASSK
>Mature_409_residues
MYHEIIILGGGASGITASIISKDMGTDVAILESNDRIGKKILTTGNGRCNISNENISSCKYYSNNNNFYKFILSQFTVQD
TKNFFNSLGLPLITLNEGKIYPMSLQASSVLDILRLAIEDRQIPIYFNNKVKNIKKSNKRFVISTENEIFQCKKLILASG
GMSAPNTGSDGSGFKLAKNFGHNIIDPVPGLVQLKLDFPYLKALSGIKFDGNVKLTLDNKNLREESGEILFTDYGISGPP
ILQLSSLVSRLLYNNKKIYLEIDMFPNMSKENIINLLENHWGTFYYRTIHDSFIGIINKKLIPTLLKYCGIKNIHMPCQD
ITWQEKERIFHALKNWIFTIAGTNSFKNSQVTCGGVDTSEVSNKSLESLKVKDLYFCGEILDVNGDCGGFNLQWAWSSGY
IAGKNASSK

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=391, Percent_Identity=28.6445012787724, Blast_Score=191, Evalue=8e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 45693; Mature: 45693

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHEIIILGGGASGITASIISKDMGTDVAILESNDRIGKKILTTGNGRCNISNENISSCK
CCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCEEEECCCCCCCEE
YYSNNNNFYKFILSQFTVQDTKNFFNSLGLPLITLNEGKIYPMSLQASSVLDILRLAIED
EEECCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHHHHHHHHHCC
RQIPIYFNNKVKNIKKSNKRFVISTENEIFQCKKLILASGGMSAPNTGSDGSGFKLAKNF
CEEEEEECCCHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
GHNIIDPVPGLVQLKLDFPYLKALSGIKFDGNVKLTLDNKNLREESGEILFTDYGISGPP
CCCCCCCCCCEEEEEECCHHHHHHCCCEECCEEEEEECCCCCCCCCCCEEEEECCCCCCC
ILQLSSLVSRLLYNNKKIYLEIDMFPNMSKENIINLLENHWGTFYYRTIHDSFIGIINKK
HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
LIPTLLKYCGIKNIHMPCQDITWQEKERIFHALKNWIFTIAGTNSFKNSQVTCGGVDTSE
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCHHH
VSNKSLESLKVKDLYFCGEILDVNGDCGGFNLQWAWSSGYIAGKNASSK
HCCCHHHHEEEEEEEEECEEEECCCCCCCEEEEEEECCCEEECCCCCCC
>Mature Secondary Structure
MYHEIIILGGGASGITASIISKDMGTDVAILESNDRIGKKILTTGNGRCNISNENISSCK
CCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCEEEECCCCCCCEE
YYSNNNNFYKFILSQFTVQDTKNFFNSLGLPLITLNEGKIYPMSLQASSVLDILRLAIED
EEECCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHHHHHHHHHCC
RQIPIYFNNKVKNIKKSNKRFVISTENEIFQCKKLILASGGMSAPNTGSDGSGFKLAKNF
CEEEEEECCCHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
GHNIIDPVPGLVQLKLDFPYLKALSGIKFDGNVKLTLDNKNLREESGEILFTDYGISGPP
CCCCCCCCCCEEEEEECCHHHHHHCCCEECCEEEEEECCCCCCCCCCCEEEEECCCCCCC
ILQLSSLVSRLLYNNKKIYLEIDMFPNMSKENIINLLENHWGTFYYRTIHDSFIGIINKK
HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
LIPTLLKYCGIKNIHMPCQDITWQEKERIFHALKNWIFTIAGTNSFKNSQVTCGGVDTSE
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCHHH
VSNKSLESLKVKDLYFCGEILDVNGDCGGFNLQWAWSSGYIAGKNASSK
HCCCHHHHEEEEEEEEECEEEECCCCCCCEEEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]