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The map label for this gene is wcaL [C]

Identifier: 226951039

GI number: 226951039

Start: 4098648

End: 4099892

Strand: Direct

Name: wcaL [C]

Synonym: CLM_4078

Alternate gene names: 226951039

Gene position: 4098648-4099892 (Clockwise)

Preceding gene: 226951038

Following gene: 226951041

Centisome position: 98.64

GC content: 26.51

Gene sequence:

>1245_bases
ATGAAAAAAATACTAAACATATTAGCTCAAAGACCTGATAAAACTGGAAGTGGTATGTATCTTCAAGCCCTTATTAAAGA
AGCTGATAAAAATGGTTACAAGCAAGCTGTAATAGCTAGCATATCCTCAAGAGATAAAAAAGTAACTTTTTCTTCAAAAA
ATCCTATTACGTTTTTTCCTTTAATATTTGAAACTTCAGATTTACCTTTTCCTATTGTAGGTATGAGCGATGTAATGCCT
TATGAAAGTACAAAATATAAAGATTTATCTATAGATATGCTAAAAAAATGGAAGGCTTCTTTCACATCAATCATAAAAGA
AGCTATTAATGAGTTTAATCCAGACATAATAATATGTCATCATTTATGGATTTTAACTGCTCTTGTAAAGGAATTGTATC
CAAATAAAAAAATTATAGCCTTTTGTCATGGAACAGATTTAAGGCAATTACAGACCTTTAAAAATAGTGATAAATCTATT
TCTAAAGAAGTAGTAAATTATGTAATAACTAATTGCAAAAATTTAGAAACTATAATAGTATCTCATAAAGATGAAAAACA
TCAAGTTATAGAATCATATAAAATAAATGAAAATAAAGTATTCATTGCAGGTACAGGTTTTAATCCAGATACTTTTTATA
TAAATGAAAGTAAAAATAATTCAAATAAAATTAAAATAGTCTATGCTGGCAAGCTAAGTTATTCCAAAGGAGTACCTTTT
TTAATTAATTCAATTAACCTAATAAAAAAATATTCAAATAATATAGAGCTTTATTTAGCTGGTTCTGGAGCTGGAGATGA
AACTACAAATATAATTAATTTATGTGAAAACAGTTCTTATAGTTTTAATATAAATGTTTTAGGATCCCTTTCTCAAAAAA
AATTATCTGACTTATTTAGAGAATGTGATATATTAGTACTTCCTTCTCTGTATGAAGGATTACCTTTAGTTTTAATAGAA
GCTATGGCTTGTGGATTAAAAATAGTTTGTACAGATCTACCTGGTATAAAGGAATGGATGGGAGATACAATTAATAATAG
TGGCATTATAAGATATGTTCCTATGCCTAAGCTAGAAAATATAGATACTATAGTACCTGCGGAAATACCTAATTTCGAAC
ACAATCTAGCTTTATCTATAGAAAAACAAATTGAAAATGATTTTGTAATAAACAATAAGCTTAAAAAAGCTATAGGAAGC
AAATCCTGGACAAAAGCCTTCTCAAATATAGAAAAGTTATTTTAA

Upstream 100 bases:

>100_bases
TTTATACTCTTTATTTTATTATATATTAATGGTAACATATTGTAGAATATACACTTATTTTGGCATATTTTAAATTAATA
TTAATCCTAGGGGGATTTCA

Downstream 100 bases:

>100_bases
AATTTCTATCCTATAATTGTATTCTAATTAAAAAACATATATTTATTATAAATAAAATATATATAATTTTAATAATACCT
TAATAAAAGAGATAATATTC

Product: group 1 glycosyl transferase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKKILNILAQRPDKTGSGMYLQALIKEADKNGYKQAVIASISSRDKKVTFSSKNPITFFPLIFETSDLPFPIVGMSDVMP
YESTKYKDLSIDMLKKWKASFTSIIKEAINEFNPDIIICHHLWILTALVKELYPNKKIIAFCHGTDLRQLQTFKNSDKSI
SKEVVNYVITNCKNLETIIVSHKDEKHQVIESYKINENKVFIAGTGFNPDTFYINESKNNSNKIKIVYAGKLSYSKGVPF
LINSINLIKKYSNNIELYLAGSGAGDETTNIINLCENSSYSFNINVLGSLSQKKLSDLFRECDILVLPSLYEGLPLVLIE
AMACGLKIVCTDLPGIKEWMGDTINNSGIIRYVPMPKLENIDTIVPAEIPNFEHNLALSIEKQIENDFVINNKLKKAIGS
KSWTKAFSNIEKLF

Sequences:

>Translated_414_residues
MKKILNILAQRPDKTGSGMYLQALIKEADKNGYKQAVIASISSRDKKVTFSSKNPITFFPLIFETSDLPFPIVGMSDVMP
YESTKYKDLSIDMLKKWKASFTSIIKEAINEFNPDIIICHHLWILTALVKELYPNKKIIAFCHGTDLRQLQTFKNSDKSI
SKEVVNYVITNCKNLETIIVSHKDEKHQVIESYKINENKVFIAGTGFNPDTFYINESKNNSNKIKIVYAGKLSYSKGVPF
LINSINLIKKYSNNIELYLAGSGAGDETTNIINLCENSSYSFNINVLGSLSQKKLSDLFRECDILVLPSLYEGLPLVLIE
AMACGLKIVCTDLPGIKEWMGDTINNSGIIRYVPMPKLENIDTIVPAEIPNFEHNLALSIEKQIENDFVINNKLKKAIGS
KSWTKAFSNIEKLF
>Mature_414_residues
MKKILNILAQRPDKTGSGMYLQALIKEADKNGYKQAVIASISSRDKKVTFSSKNPITFFPLIFETSDLPFPIVGMSDVMP
YESTKYKDLSIDMLKKWKASFTSIIKEAINEFNPDIIICHHLWILTALVKELYPNKKIIAFCHGTDLRQLQTFKNSDKSI
SKEVVNYVITNCKNLETIIVSHKDEKHQVIESYKINENKVFIAGTGFNPDTFYINESKNNSNKIKIVYAGKLSYSKGVPF
LINSINLIKKYSNNIELYLAGSGAGDETTNIINLCENSSYSFNINVLGSLSQKKLSDLFRECDILVLPSLYEGLPLVLIE
AMACGLKIVCTDLPGIKEWMGDTINNSGIIRYVPMPKLENIDTIVPAEIPNFEHNLALSIEKQIENDFVINNKLKKAIGS
KSWTKAFSNIEKLF

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 46666; Mature: 46666

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILNILAQRPDKTGSGMYLQALIKEADKNGYKQAVIASISSRDKKVTFSSKNPITFFP
CHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEE
LIFETSDLPFPIVGMSDVMPYESTKYKDLSIDMLKKWKASFTSIIKEAINEFNPDIIICH
EEEECCCCCEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
HLWILTALVKELYPNKKIIAFCHGTDLRQLQTFKNSDKSISKEVVNYVITNCKNLETIIV
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE
SHKDEKHQVIESYKINENKVFIAGTGFNPDTFYINESKNNSNKIKIVYAGKLSYSKGVPF
ECCCHHHHHHHHEEECCCEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCH
LINSINLIKKYSNNIELYLAGSGAGDETTNIINLCENSSYSFNINVLGSLSQKKLSDLFR
HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHH
ECDILVLPSLYEGLPLVLIEAMACGLKIVCTDLPGIKEWMGDTINNSGIIRYVPMPKLEN
HCCEEEECHHHCCHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCEEEEECCCCCCC
IDTIVPAEIPNFEHNLALSIEKQIENDFVINNKLKKAIGSKSWTKAFSNIEKLF
CCCCCCCCCCCCCCCEEEEEEHHCCCCEEECHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKILNILAQRPDKTGSGMYLQALIKEADKNGYKQAVIASISSRDKKVTFSSKNPITFFP
CHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEE
LIFETSDLPFPIVGMSDVMPYESTKYKDLSIDMLKKWKASFTSIIKEAINEFNPDIIICH
EEEECCCCCEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
HLWILTALVKELYPNKKIIAFCHGTDLRQLQTFKNSDKSISKEVVNYVITNCKNLETIIV
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE
SHKDEKHQVIESYKINENKVFIAGTGFNPDTFYINESKNNSNKIKIVYAGKLSYSKGVPF
ECCCHHHHHHHHEEECCCEEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCH
LINSINLIKKYSNNIELYLAGSGAGDETTNIINLCENSSYSFNINVLGSLSQKKLSDLFR
HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHH
ECDILVLPSLYEGLPLVLIEAMACGLKIVCTDLPGIKEWMGDTINNSGIIRYVPMPKLEN
HCCEEEECHHHCCHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCEEEEECCCCCCC
IDTIVPAEIPNFEHNLALSIEKQIENDFVINNKLKKAIGSKSWTKAFSNIEKLF
CCCCCCCCCCCCCCCEEEEEEHHCCCCEEECHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]