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The map label for this gene is 226950544

Identifier: 226950544

GI number: 226950544

Start: 3550785

End: 3551861

Strand: Reverse

Name: 226950544

Synonym: CLM_3520

Alternate gene names: NA

Gene position: 3551861-3550785 (Counterclockwise)

Preceding gene: 226950545

Following gene: 226950543

Centisome position: 85.48

GC content: 24.23

Gene sequence:

>1077_bases
ATGGAAATGAAATCATATTTAGCAGAAAAATTATCTAAAATGTTGTTTTTAGAAATAAAAAAAGGAAAAATATTTGAAAT
ATTTAAAGTTCGTGTAGATGAAAATATATATGTACCACTAAAGTCTAAGAGCTTAGTGGAGGAGATAAAACAAAGTGAAA
ATTTAGATAATATACCTATTATTTTTTTCCTAGAAGGAATGTTTTTTGTATTAGGAGCAGATGAGGATTTTAAGTTTAAT
AATGAATACAAAAATATGCTAGATAATATACCTAAAAGTGAAGATTATATTAAAGGAAGAATATTTGAAGAAATAAAGAG
AGAAAACTATGAAGATGCATATGTATTATTAAAAGGGTTATTGACATTAGAAGAGAGCAAGGATATTTATAACAAGTTAA
TATTAATATTAGAAAATTTAAGACAAAAGGATAAAATGTATAAAGAAGAAGAACTTAACATAATAGAAAGGGCTAAAAAA
TTAGAAGGGTATGAAAAACCATATTTATATGAATCCATAATAAAAAAAGAGGATAATGATTTTAAAGCAGCCTGGTATGC
TTTGGATAAATACATATCAGTGGGAGGAGAGAAAACTACAGATATTATAGAATATAAAAATTCATTAAAGGATATATTAA
GTTTTGAGGAAGGAAAAAAATTAATATATAAAAATCCTAAAGAAGCTTTAACAAAATTGATACCAATTATGAATAAATTA
GAGGATAATCCAACGGTATATTATTATGTAGCAGTAGCCTACAGAATGTTAGAAAATTATGATAAAGCTATATATTATTT
AAATAAAGCCTTAGAAATAGACAATGGATTAATTGATGCAGTAAATGAATTAGCAATAAATTATGCAGCATTAGAAAACT
ATGATATTGCTATAAAATATTTAAGAAAAGCTTTTGAAGTAGAAAAGTCTATAGAAATATGTACTAATCTTATAATGTGC
TATTTAAATAAGGGAGACTTAGAGCAAGCACAAAATCATATAGATATTGCTAAAAAAATTGATCCAGAAGATGAAATATT
AAAAGAGATTGAAGGTTATCTATCAAAACACAACTAA

Upstream 100 bases:

>100_bases
TCCTATGCATAATTTAAATATTTTTGTATTTTCATTGTTTAATCATTTATATTATTATAGAATTAATATAAATATAGAAT
TTATAGTGTAGGTGATATAG

Downstream 100 bases:

>100_bases
GTTTAATATTAAATTTGTTTTATTTTTGTATGTAGAAAGGGGTATATTTATGAAAGTTAAAAAGGCCATAATTCCTGCAG
CAGGATTAGGAACAAGATTT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain Protein; TPR-Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MEMKSYLAEKLSKMLFLEIKKGKIFEIFKVRVDENIYVPLKSKSLVEEIKQSENLDNIPIIFFLEGMFFVLGADEDFKFN
NEYKNMLDNIPKSEDYIKGRIFEEIKRENYEDAYVLLKGLLTLEESKDIYNKLILILENLRQKDKMYKEEELNIIERAKK
LEGYEKPYLYESIIKKEDNDFKAAWYALDKYISVGGEKTTDIIEYKNSLKDILSFEEGKKLIYKNPKEALTKLIPIMNKL
EDNPTVYYYVAVAYRMLENYDKAIYYLNKALEIDNGLIDAVNELAINYAALENYDIAIKYLRKAFEVEKSIEICTNLIMC
YLNKGDLEQAQNHIDIAKKIDPEDEILKEIEGYLSKHN

Sequences:

>Translated_358_residues
MEMKSYLAEKLSKMLFLEIKKGKIFEIFKVRVDENIYVPLKSKSLVEEIKQSENLDNIPIIFFLEGMFFVLGADEDFKFN
NEYKNMLDNIPKSEDYIKGRIFEEIKRENYEDAYVLLKGLLTLEESKDIYNKLILILENLRQKDKMYKEEELNIIERAKK
LEGYEKPYLYESIIKKEDNDFKAAWYALDKYISVGGEKTTDIIEYKNSLKDILSFEEGKKLIYKNPKEALTKLIPIMNKL
EDNPTVYYYVAVAYRMLENYDKAIYYLNKALEIDNGLIDAVNELAINYAALENYDIAIKYLRKAFEVEKSIEICTNLIMC
YLNKGDLEQAQNHIDIAKKIDPEDEILKEIEGYLSKHN
>Mature_358_residues
MEMKSYLAEKLSKMLFLEIKKGKIFEIFKVRVDENIYVPLKSKSLVEEIKQSENLDNIPIIFFLEGMFFVLGADEDFKFN
NEYKNMLDNIPKSEDYIKGRIFEEIKRENYEDAYVLLKGLLTLEESKDIYNKLILILENLRQKDKMYKEEELNIIERAKK
LEGYEKPYLYESIIKKEDNDFKAAWYALDKYISVGGEKTTDIIEYKNSLKDILSFEEGKKLIYKNPKEALTKLIPIMNKL
EDNPTVYYYVAVAYRMLENYDKAIYYLNKALEIDNGLIDAVNELAINYAALENYDIAIKYLRKAFEVEKSIEICTNLIMC
YLNKGDLEQAQNHIDIAKKIDPEDEILKEIEGYLSKHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42216; Mature: 42216

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMKSYLAEKLSKMLFLEIKKGKIFEIFKVRVDENIYVPLKSKSLVEEIKQSENLDNIPI
CCHHHHHHHHHHHHHHHEECCCCEEEEEEEEECCEEEEEECCHHHHHHHHHHCCCCCCCH
IFFLEGMFFVLGADEDFKFNNEYKNMLDNIPKSEDYIKGRIFEEIKRENYEDAYVLLKGL
HEEEHHHHHEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LTLEESKDIYNKLILILENLRQKDKMYKEEELNIIERAKKLEGYEKPYLYESIIKKEDND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
FKAAWYALDKYISVGGEKTTDIIEYKNSLKDILSFEEGKKLIYKNPKEALTKLIPIMNKL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHC
EDNPTVYYYVAVAYRMLENYDKAIYYLNKALEIDNGLIDAVNELAINYAALENYDIAIKY
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
LRKAFEVEKSIEICTNLIMCYLNKGDLEQAQNHIDIAKKIDPEDEILKEIEGYLSKHN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEMKSYLAEKLSKMLFLEIKKGKIFEIFKVRVDENIYVPLKSKSLVEEIKQSENLDNIPI
CCHHHHHHHHHHHHHHHEECCCCEEEEEEEEECCEEEEEECCHHHHHHHHHHCCCCCCCH
IFFLEGMFFVLGADEDFKFNNEYKNMLDNIPKSEDYIKGRIFEEIKRENYEDAYVLLKGL
HEEEHHHHHEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LTLEESKDIYNKLILILENLRQKDKMYKEEELNIIERAKKLEGYEKPYLYESIIKKEDND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
FKAAWYALDKYISVGGEKTTDIIEYKNSLKDILSFEEGKKLIYKNPKEALTKLIPIMNKL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHC
EDNPTVYYYVAVAYRMLENYDKAIYYLNKALEIDNGLIDAVNELAINYAALENYDIAIKY
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
LRKAFEVEKSIEICTNLIMCYLNKGDLEQAQNHIDIAKKIDPEDEILKEIEGYLSKHN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA