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The map label for this gene is 226950471

Identifier: 226950471

GI number: 226950471

Start: 3471474

End: 3471686

Strand: Reverse

Name: 226950471

Synonym: CLM_3446

Alternate gene names: NA

Gene position: 3471686-3471474 (Counterclockwise)

Preceding gene: 226950472

Following gene: 226950470

Centisome position: 83.55

GC content: 28.17

Gene sequence:

>213_bases
GTGACAGTAATAAAAACAAAAGAATATAGAATAATAAGAAACTTATCTATTTCAAAATTGAGTTGTAAAAGTAAAATAGC
TAGAAGCTATATTACAGAATTAGAAGAAGGTAAATATGGGAATCCAGGGCTAAAAGTTATTTGTAACTTATGCAAAGCAC
TACAAATTACACCAAATGAATTGATAGATCAAGAACTATGGAAGTGGTGGTAA

Upstream 100 bases:

>100_bases
ATAGACGAACTTTTTTTTAGAAGAAATGGTAAACTTTAAGAATACTTGCGAATTTATAGTTTAATATTGAGAGGAATAAA
TCCTAAGGAGGAATCCTCAA

Downstream 100 bases:

>100_bases
AGAAAGTAAATTAATAATTATTAAAGAAGTATAAAAAAGCTATATATAGATTATGTATTGATTTAATTATAGCAATATTT
TATTTCGTGTAATATGGATA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MTVIKTKEYRIIRNLSISKLSCKSKIARSYITELEEGKYGNPGLKVICNLCKALQITPNELIDQELWKWW

Sequences:

>Translated_70_residues
MTVIKTKEYRIIRNLSISKLSCKSKIARSYITELEEGKYGNPGLKVICNLCKALQITPNELIDQELWKWW
>Mature_69_residues
TVIKTKEYRIIRNLSISKLSCKSKIARSYITELEEGKYGNPGLKVICNLCKALQITPNELIDQELWKWW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8201; Mature: 8070

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIKTKEYRIIRNLSISKLSCKSKIARSYITELEEGKYGNPGLKVICNLCKALQITPNE
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHH
LIDQELWKWW
HHHHHHHHCC
>Mature Secondary Structure 
TVIKTKEYRIIRNLSISKLSCKSKIARSYITELEEGKYGNPGLKVICNLCKALQITPNE
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHH
LIDQELWKWW
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA