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The map label for this gene is ybgI [C]

Identifier: 226950361

GI number: 226950361

Start: 3360278

End: 3361081

Strand: Reverse

Name: ybgI [C]

Synonym: CLM_3329

Alternate gene names: 226950361

Gene position: 3361081-3360278 (Counterclockwise)

Preceding gene: 226950362

Following gene: 226950360

Centisome position: 80.89

GC content: 26.62

Gene sequence:

>804_bases
ATGTATTTAAATGTTAAAAACATAGAAAATATAATAGAAGAATATGCTCCTTTATATTTAAAGGAAAATTACGATAATGT
GGGCCTTATGGTAGGGGATTCAAAAGCCACTGTAAATAAAATATTAGTTGCTTTAGATTGTACCTTAGATGTAATAGAAG
AGGCGAAAAAAAAGGAGTGTAACTTGATAGTTACTCATCATCCTTTATTATTTAAAAAACCTTCTTCTATAACTACAAAT
ACTTTATTGGGTAAAAAAATAATAGAATTGATAAAAAATGATATAAATTTATATTCTAGTCATACAAATTTAGACTCTAC
AGAAAATGGCTTTAATCAAATAGTAGCAGAACTTTTGAAGTTACAAGATTTAAAAATATTAGATACTAACGCTTATAATA
ATAATACGGGTATAGGTAGAATAGGTTATTTAAAAGAAGAAGTTACTTTAGATAAATTATGTGAAATTGTAAAAGAAGTT
TTCAATATTCCTGCGTTAAGATACTCAGGAGAAGACTCTTTAAAAATAAAAAAAGTAGCTATAATAAACGGTAGTGGTCA
AGATTATTTTAATAAAGCAAAAGATTTAGGTGCAGATTGTGTAATAACAGGGGATACAACATACCATTATGTAAGTGATT
TAATGGAAGAAAAAATAGGAGTTATTGATGCAGAGCACTTTCATACAGAATGGCCAGCTTTACAATGCTTTTATAAATGG
CTAAAAAATAGAATAGAAGAAATGGGTTTTAAAAATGATGTTCTTTTATCTGAGAACAATTTTTCGCCCTACAAATATAA
ATAG

Upstream 100 bases:

>100_bases
ATAAAAAAATACTACAATATATAAGAGAAGACACAGAAAGTGCAGCCTTAAGAAAAGCAGAAATAAAAGAAAAAATATTT
AAATTGGAGGAGCTGGTACA

Downstream 100 bases:

>100_bases
AAATGAGTCTAATGTACTCGTTTCTATTTTTTTATATATTCATAACATATCCATAACATAGATTTAAAATTCACTAGGTA
TAATATAAAGAGGTATCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKECNLIVTHHPLLFKKPSSITTN
TLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLKLQDLKILDTNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFNKAKDLGADCVITGDTTYHYVSDLMEEKIGVIDAEHFHTEWPALQCFYKW
LKNRIEEMGFKNDVLLSENNFSPYKYK

Sequences:

>Translated_267_residues
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKECNLIVTHHPLLFKKPSSITTN
TLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLKLQDLKILDTNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFNKAKDLGADCVITGDTTYHYVSDLMEEKIGVIDAEHFHTEWPALQCFYKW
LKNRIEEMGFKNDVLLSENNFSPYKYK
>Mature_267_residues
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKECNLIVTHHPLLFKKPSSITTN
TLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLKLQDLKILDTNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFNKAKDLGADCVITGDTTYHYVSDLMEEKIGVIDAEHFHTEWPALQCFYKW
LKNRIEEMGFKNDVLLSENNFSPYKYK

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272362, Length=117, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI209862879, Length=119, Percent_Identity=33.6134453781513, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI215272360, Length=118, Percent_Identity=33.8983050847458, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI56605983, Length=118, Percent_Identity=33.8983050847458, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6321217, Length=279, Percent_Identity=28.3154121863799, Blast_Score=93, Evalue=4e-20,
Organism=Drosophila melanogaster, GI19921430, Length=241, Percent_Identity=29.4605809128631, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 30427; Mature: 30427

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKEC
CEECHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NLIVTHHPLLFKKPSSITTNTLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLK
CEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH
LQDLKILDTNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEVFNIPALRYSGEDSLKIKKVA
HCCCEEEECCCCCCCCCCCEECCHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEEEE
IINGSGQDYFNKAKDLGADCVITGDTTYHYVSDLMEEKIGVIDAEHFHTEWPALQCFYKW
EEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHH
LKNRIEEMGFKNDVLLSENNFSPYKYK
HHHHHHHCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MYLNVKNIENIIEEYAPLYLKENYDNVGLMVGDSKATVNKILVALDCTLDVIEEAKKKEC
CEECHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NLIVTHHPLLFKKPSSITTNTLLGKKIIELIKNDINLYSSHTNLDSTENGFNQIVAELLK
CEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH
LQDLKILDTNAYNNNTGIGRIGYLKEEVTLDKLCEIVKEVFNIPALRYSGEDSLKIKKVA
HCCCEEEECCCCCCCCCCCEECCHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEEEE
IINGSGQDYFNKAKDLGADCVITGDTTYHYVSDLMEEKIGVIDAEHFHTEWPALQCFYKW
EEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHH
LKNRIEEMGFKNDVLLSENNFSPYKYK
HHHHHHHCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]