| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is purH [H]
Identifier: 226950306
GI number: 226950306
Start: 3293763
End: 3295262
Strand: Reverse
Name: purH [H]
Synonym: CLM_3270
Alternate gene names: 226950306
Gene position: 3295262-3293763 (Counterclockwise)
Preceding gene: 226950307
Following gene: 226950305
Centisome position: 79.3
GC content: 30.67
Gene sequence:
>1500_bases GTGATAAAAAGAGCATTAATAAGTGTATTTGATAAAACAGGAATTTTAGATTTGGCAAAGTTTTTAGAAAGTAGAGATGT AGAAATAATATCTACAGGTGGAACTTATAAACATTTAAAAGAAAATGGAGTAAAAGTAATAGATATAGAAGAGGTAACAG GTTTCCCAGAAATGTTAGATGGAAGAGTAAAAACATTAAATCCTTTAATTCATGGAGGCATATTAGCTATAAGAGATAAT GAAGAGCATATGAAGGTAATAGAAGAAAAGGGCATAAACCCTATAGATATGGTAGTAGTGAATTTATATCCTTTCTTTAA TAAAGTAGAAGAAAATTTAAGTTTTGATGAAAAAGTAGAGTTTATAGACATTGGTGGACCTACTATGATAAGAGCAGCAG CTAAAAATTTTAAAGATGTAGTAGTACTAACAGATACTAAGGATTATGAAAATGTCATAAATGAGATAAAAGAAAATAAT CAGGTTAATACACAAACTAGAAAAAAATTAGCAGGAAAAGTTTTCAATCTAATGTCAGCCTATGATGCAGCTATAAGTAA TTTCTTATTAGAAGAGGAATATCCAGAATATTTAACTCTATCCTATAAAAAGAACATGGATTTAAGATATGGAGAAAATC CTCATCAAACAGCAGCTTATTACACATCTACTGTTGGAAAATATCCTATGAAAAATTTTGAAAAGTTAAATGGAAAAGAA TTATCCTACAATAATATAAAGGATATGGATATAGCGTGGAAAACCGTTTGTGAATTTGAAGAGGTGGCTTGTTGTGCATT AAAACATAATACACCTTGTGGTGTGGCTATAGGGGATACTGTACAGGAAGCTTATACTAAGGCCTATGAATGTGATCCTA TATCTATATTTGGTGGCATAGTTGCTTTTAATAGAAAAGTAGATAAGGAAACAGCAGAAAATCTTGCAAAAATATTTTTA GAAATAGTTGTAGCACCAGATTTTGATGAAGATGCTTTAGAAGTCTTAAAAAACAAGAAAAATTTAAGGGTTATAAAATG TGAAGAAAAATCTACAGAAGGAAAAGATATGGCAAAGGTAGATGGAGGAATATTAGTACAAAAGAGTGATAATAAATTAT TAGAAAATACAAAAGTAGTTACAGAAAAATCTCCAACAGAGCAAGAAATGAAAGATCTTATATTTGGTATGAAAGTAGTT AAATATGTGAAATCCAACGCTATTGTAGTAGTTAAAGATGGTATGGCAAAAGGTATTGGGGGAGGCCAAGTAAATAGAAT ATGGGCAGCAAAGGAAGCATTAGATAGAGCTGGAGATGGCGTAGTTTTAGCTTCAGATGCTTTTTTCCCATTTGGAGATG TAGCAGAAGAAGCTGCAAAATGGGGAATAAAAGCTATAATTCAACCAGGCGGTTCTATAAGAGATGAAGAATCTATAAAG GTATGTAATGAAAAAGGGATTTCTATGGTATTTACAGGAATAAGACATTTTAAACACTAG
Upstream 100 bases:
>100_bases GTGCCACTTATATGTTTTCTTTGAAAGAAGGTATATTGGTGGCAGTTACTTATGACAGATAAATAAGATAATAAAAAATA TTGAAACTGGGGGAGTTTAA
Downstream 100 bases:
>100_bases ATTTAAATATTTTTTAGTTAAAGGATAAAAGTCTTAATAAGATATTCTAATACTGAGATGAAAAGAGATATTTTTTATAA AGAAATTTCATCTCAATATT
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MIKRALISVFDKTGILDLAKFLESRDVEIISTGGTYKHLKENGVKVIDIEEVTGFPEMLDGRVKTLNPLIHGGILAIRDN EEHMKVIEEKGINPIDMVVVNLYPFFNKVEENLSFDEKVEFIDIGGPTMIRAAAKNFKDVVVLTDTKDYENVINEIKENN QVNTQTRKKLAGKVFNLMSAYDAAISNFLLEEEYPEYLTLSYKKNMDLRYGENPHQTAAYYTSTVGKYPMKNFEKLNGKE LSYNNIKDMDIAWKTVCEFEEVACCALKHNTPCGVAIGDTVQEAYTKAYECDPISIFGGIVAFNRKVDKETAENLAKIFL EIVVAPDFDEDALEVLKNKKNLRVIKCEEKSTEGKDMAKVDGGILVQKSDNKLLENTKVVTEKSPTEQEMKDLIFGMKVV KYVKSNAIVVVKDGMAKGIGGGQVNRIWAAKEALDRAGDGVVLASDAFFPFGDVAEEAAKWGIKAIIQPGGSIRDEESIK VCNEKGISMVFTGIRHFKH
Sequences:
>Translated_499_residues MIKRALISVFDKTGILDLAKFLESRDVEIISTGGTYKHLKENGVKVIDIEEVTGFPEMLDGRVKTLNPLIHGGILAIRDN EEHMKVIEEKGINPIDMVVVNLYPFFNKVEENLSFDEKVEFIDIGGPTMIRAAAKNFKDVVVLTDTKDYENVINEIKENN QVNTQTRKKLAGKVFNLMSAYDAAISNFLLEEEYPEYLTLSYKKNMDLRYGENPHQTAAYYTSTVGKYPMKNFEKLNGKE LSYNNIKDMDIAWKTVCEFEEVACCALKHNTPCGVAIGDTVQEAYTKAYECDPISIFGGIVAFNRKVDKETAENLAKIFL EIVVAPDFDEDALEVLKNKKNLRVIKCEEKSTEGKDMAKVDGGILVQKSDNKLLENTKVVTEKSPTEQEMKDLIFGMKVV KYVKSNAIVVVKDGMAKGIGGGQVNRIWAAKEALDRAGDGVVLASDAFFPFGDVAEEAAKWGIKAIIQPGGSIRDEESIK VCNEKGISMVFTGIRHFKH >Mature_499_residues MIKRALISVFDKTGILDLAKFLESRDVEIISTGGTYKHLKENGVKVIDIEEVTGFPEMLDGRVKTLNPLIHGGILAIRDN EEHMKVIEEKGINPIDMVVVNLYPFFNKVEENLSFDEKVEFIDIGGPTMIRAAAKNFKDVVVLTDTKDYENVINEIKENN QVNTQTRKKLAGKVFNLMSAYDAAISNFLLEEEYPEYLTLSYKKNMDLRYGENPHQTAAYYTSTVGKYPMKNFEKLNGKE LSYNNIKDMDIAWKTVCEFEEVACCALKHNTPCGVAIGDTVQEAYTKAYECDPISIFGGIVAFNRKVDKETAENLAKIFL EIVVAPDFDEDALEVLKNKKNLRVIKCEEKSTEGKDMAKVDGGILVQKSDNKLLENTKVVTEKSPTEQEMKDLIFGMKVV KYVKSNAIVVVKDGMAKGIGGGQVNRIWAAKEALDRAGDGVVLASDAFFPFGDVAEEAAKWGIKAIIQPGGSIRDEESIK VCNEKGISMVFTGIRHFKH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=467, Percent_Identity=35.5460385438972, Blast_Score=244, Evalue=1e-64, Organism=Escherichia coli, GI1790439, Length=525, Percent_Identity=46.4761904761905, Blast_Score=473, Evalue=1e-134, Organism=Caenorhabditis elegans, GI71985564, Length=471, Percent_Identity=36.0934182590234, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71985574, Length=324, Percent_Identity=28.7037037037037, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71985556, Length=60, Percent_Identity=45, Blast_Score=68, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6323768, Length=467, Percent_Identity=35.3319057815846, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6323056, Length=466, Percent_Identity=35.1931330472103, Blast_Score=250, Evalue=5e-67, Organism=Drosophila melanogaster, GI24649832, Length=469, Percent_Identity=33.6886993603412, Blast_Score=246, Evalue=3e-65,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 55735; Mature: 55735
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRALISVFDKTGILDLAKFLESRDVEIISTGGTYKHLKENGVKVIDIEEVTGFPEMLD CCHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCEEEEEHHHCCCHHHHC GRVKTLNPLIHGGILAIRDNEEHMKVIEEKGINPIDMVVVNLYPFFNKVEENLSFDEKVE CCHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE FIDIGGPTMIRAAAKNFKDVVVLTDTKDYENVINEIKENNQVNTQTRKKLAGKVFNLMSA EEECCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH YDAAISNFLLEEEYPEYLTLSYKKNMDLRYGENPHQTAAYYTSTVGKYPMKNFEKLNGKE HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCC LSYNNIKDMDIAWKTVCEFEEVACCALKHNTPCGVAIGDTVQEAYTKAYECDPISIFGGI CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHH VAFNRKVDKETAENLAKIFLEIVVAPDFDEDALEVLKNKKNLRVIKCEEKSTEGKDMAKV HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHCC DGGILVQKSDNKLLENTKVVTEKSPTEQEMKDLIFGMKVVKYVKSNAIVVVKDGMAKGIG CCCEEEEECCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC GGQVNRIWAAKEALDRAGDGVVLASDAFFPFGDVAEEAAKWGIKAIIQPGGSIRDEESIK CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHH VCNEKGISMVFTGIRHFKH HHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MIKRALISVFDKTGILDLAKFLESRDVEIISTGGTYKHLKENGVKVIDIEEVTGFPEMLD CCHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCEEEEEHHHCCCHHHHC GRVKTLNPLIHGGILAIRDNEEHMKVIEEKGINPIDMVVVNLYPFFNKVEENLSFDEKVE CCHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE FIDIGGPTMIRAAAKNFKDVVVLTDTKDYENVINEIKENNQVNTQTRKKLAGKVFNLMSA EEECCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH YDAAISNFLLEEEYPEYLTLSYKKNMDLRYGENPHQTAAYYTSTVGKYPMKNFEKLNGKE HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCC LSYNNIKDMDIAWKTVCEFEEVACCALKHNTPCGVAIGDTVQEAYTKAYECDPISIFGGI CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHH VAFNRKVDKETAENLAKIFLEIVVAPDFDEDALEVLKNKKNLRVIKCEEKSTEGKDMAKV HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHCC DGGILVQKSDNKLLENTKVVTEKSPTEQEMKDLIFGMKVVKYVKSNAIVVVKDGMAKGIG CCCEEEEECCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC GGQVNRIWAAKEALDRAGDGVVLASDAFFPFGDVAEEAAKWGIKAIIQPGGSIRDEESIK CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHH VCNEKGISMVFTGIRHFKH HHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA