| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is yqeB [H]
Identifier: 226950279
GI number: 226950279
Start: 3263968
End: 3264510
Strand: Direct
Name: yqeB [H]
Synonym: CLM_3241
Alternate gene names: 226950279
Gene position: 3263968-3264510 (Clockwise)
Preceding gene: 226950278
Following gene: 226950295
Centisome position: 78.55
GC content: 32.23
Gene sequence:
>543_bases TTGCCGTGGATACCTTTCCAAGGGCCTTTAAAGCTAATTGCATCCTATAATGGAGCCTGGGTAGATATTGTTACAATGAT TCTAGGTTTGATTGCGGGAATTACATTGACTCTTTTTTCTTTTCATGAAAGCTTAGAAACGTCTGTATACTATGATAAAG TTATATTAAAAATTAGAGATGATGAAATTATCTTAAAAAAGAAAGATATTTCATTTGTATTTATGGATAAAAAGCAATTA GTGTTATTAGGTCATGATAAGAAAGAACTATTTCGTTGTAAGCAAGAGCTTAATAAAAGCAGGGTAGGTGCTGTATTTAT AAAACATCATTATCTTTGGGGTGATACGGATCCATTTAAAAAAGATTTTAAAACATGGGTGGTGGATTCTCCTGACCTAT CCCCTGCTGCGAATGCTCTATTAAAATCAAGGAAAATAGCAATTGAAAAAGGAAATGATGAAGAAGCTTTTCAATTGGCT CAAGAACTTTGGAAACTAAGAGTATCAGTAAAAGAAAAGGACAAAAGGCAATATTATCGATAA
Upstream 100 bases:
>100_bases TTTTTCAAAAACGGATAAGGTTATCTTGTGGCTTGGTTTCCCTCTTATCGGTTTAGTGTTGGGTTGGTTTCTTCCGAGTA TTGCTAAATGGGGCATTTCT
Downstream 100 bases:
>100_bases AAATTAGCGTGTATTTCTTTAAATTGTGGCAACGAGAAATATGGTAAGTAGATGGAGCACACCTCTAGGACGCTTTTTGA CCACATTATCGGAATTTAGC
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPWIPFQGPLKLIASYNGAWVDIVTMILGLIAGITLTLFSFHESLETSVYYDKVILKIRDDEIILKKKDISFVFMDKKQL VLLGHDKKELFRCKQELNKSRVGAVFIKHHYLWGDTDPFKKDFKTWVVDSPDLSPAANALLKSRKIAIEKGNDEEAFQLA QELWKLRVSVKEKDKRQYYR
Sequences:
>Translated_180_residues MPWIPFQGPLKLIASYNGAWVDIVTMILGLIAGITLTLFSFHESLETSVYYDKVILKIRDDEIILKKKDISFVFMDKKQL VLLGHDKKELFRCKQELNKSRVGAVFIKHHYLWGDTDPFKKDFKTWVVDSPDLSPAANALLKSRKIAIEKGNDEEAFQLA QELWKLRVSVKEKDKRQYYR >Mature_179_residues PWIPFQGPLKLIASYNGAWVDIVTMILGLIAGITLTLFSFHESLETSVYYDKVILKIRDDEIILKKKDISFVFMDKKQLV LLGHDKKELFRCKQELNKSRVGAVFIKHHYLWGDTDPFKKDFKTWVVDSPDLSPAANALLKSRKIAIEKGNDEEAFQLAQ ELWKLRVSVKEKDKRQYYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20992; Mature: 20861
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWIPFQGPLKLIASYNGAWVDIVTMILGLIAGITLTLFSFHESLETSVYYDKVILKIRD CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC DEIILKKKDISFVFMDKKQLVLLGHDKKELFRCKQELNKSRVGAVFIKHHYLWGDTDPFK CEEEEEECCCEEEEECCCEEEEEECCHHHHHHHHHHHCHHHHHEEEEEEEEECCCCCHHH KDFKTWVVDSPDLSPAANALLKSRKIAIEKGNDEEAFQLAQELWKLRVSVKEKDKRQYYR HHHHEEECCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PWIPFQGPLKLIASYNGAWVDIVTMILGLIAGITLTLFSFHESLETSVYYDKVILKIRD CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC DEIILKKKDISFVFMDKKQLVLLGHDKKELFRCKQELNKSRVGAVFIKHHYLWGDTDPFK CEEEEEECCCEEEEECCCEEEEEECCHHHHHHHHHHHCHHHHHEEEEEEEEECCCCCHHH KDFKTWVVDSPDLSPAANALLKSRKIAIEKGNDEEAFQLAQELWKLRVSVKEKDKRQYYR HHHHEEECCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]