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The map label for this gene is 226950278

Identifier: 226950278

GI number: 226950278

Start: 3263237

End: 3263845

Strand: Direct

Name: 226950278

Synonym: CLM_3240

Alternate gene names: NA

Gene position: 3263237-3263845 (Clockwise)

Preceding gene: 226950277

Following gene: 226950279

Centisome position: 78.53

GC content: 31.36

Gene sequence:

>609_bases
ATGAGTAAAAGCGAAACAACACGACAAAAAATTCTTGAAACGACCACATGGTTAATTGGACAGTATGGAATTGAAAAATC
TTCACTTTCCATGATTGCTAACTCTGTAGGCATACAGAAACCATCAATATATTATTATTACTCTTCGAAAGAAGAACTAG
TGGACGCTGTATTAGCTTGGATTTTAGAGGGATATAGTTTTGAAAAATACTTTCAGATTAATGAGTATACGAAAAATAAT
TTTGTAGAGAAGATTATTAGTGATGGATTACAATTGTTGATTGAAGAATCTACAGATACACAAATTCTTGTTGTCCAGGT
GTTAAATGAGTTTCTTTTATATGGAAATCGAAAATCTTCACATAATAAAGAGTATAGATTAAAGATTAAAGCTGTGCAGG
AAGGTTTTATTAACGGTTTTATAAGGTTAATGCAAAAAGGGGCAGAATTTGGTCTTATTGATTCAAAAGGATTACGTGAA
AAAGCATCTGTATTAGCGTTAACACTTGATAACTTATCAAACTATCCGATGATAGGGATTCAATTAGATGTTACAGCTGT
ATGGAGACAAGCCGTTACAAGTTTATTATCTAAGGGGGAATTTAAATAA

Upstream 100 bases:

>100_bases
TTTTATTCAGCGGATAAGCAAATTCCTAATGAATCATCTTGACAATCAGCGTAATTATGTGCTATTGTTTAACTAACGTT
AGGTAGAAAATGGTGAGAAA

Downstream 100 bases:

>100_bases
GCGATAATCATACATTATTAAATTTTTCAAAAACGGATAAGGTTATCTTGTGGCTTGGTTTCCCTCTTATCGGTTTAGTG
TTGGGTTGGTTTCTTCCGAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator YfiR

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSKSETTRQKILETTTWLIGQYGIEKSSLSMIANSVGIQKPSIYYYYSSKEELVDAVLAWILEGYSFEKYFQINEYTKNN
FVEKIISDGLQLLIEESTDTQILVVQVLNEFLLYGNRKSSHNKEYRLKIKAVQEGFINGFIRLMQKGAEFGLIDSKGLRE
KASVLALTLDNLSNYPMIGIQLDVTAVWRQAVTSLLSKGEFK

Sequences:

>Translated_202_residues
MSKSETTRQKILETTTWLIGQYGIEKSSLSMIANSVGIQKPSIYYYYSSKEELVDAVLAWILEGYSFEKYFQINEYTKNN
FVEKIISDGLQLLIEESTDTQILVVQVLNEFLLYGNRKSSHNKEYRLKIKAVQEGFINGFIRLMQKGAEFGLIDSKGLRE
KASVLALTLDNLSNYPMIGIQLDVTAVWRQAVTSLLSKGEFK
>Mature_201_residues
SKSETTRQKILETTTWLIGQYGIEKSSLSMIANSVGIQKPSIYYYYSSKEELVDAVLAWILEGYSFEKYFQINEYTKNNF
VEKIISDGLQLLIEESTDTQILVVQVLNEFLLYGNRKSSHNKEYRLKIKAVQEGFINGFIRLMQKGAEFGLIDSKGLREK
ASVLALTLDNLSNYPMIGIQLDVTAVWRQAVTSLLSKGEFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23048; Mature: 22917

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSETTRQKILETTTWLIGQYGIEKSSLSMIANSVGIQKPSIYYYYSSKEELVDAVLAW
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
ILEGYSFEKYFQINEYTKNNFVEKIISDGLQLLIEESTDTQILVVQVLNEFLLYGNRKSS
HHCCCCHHHEEEEHHHHHHHHHHHHHHHHHHEEHCCCCCCEEHHHHHHHHHHHCCCCCCC
HNKEYRLKIKAVQEGFINGFIRLMQKGAEFGLIDSKGLREKASVLALTLDNLSNYPMIGI
CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEECCCCCCCEEEE
QLDVTAVWRQAVTSLLSKGEFK
EEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKSETTRQKILETTTWLIGQYGIEKSSLSMIANSVGIQKPSIYYYYSSKEELVDAVLAW
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
ILEGYSFEKYFQINEYTKNNFVEKIISDGLQLLIEESTDTQILVVQVLNEFLLYGNRKSS
HHCCCCHHHEEEEHHHHHHHHHHHHHHHHHHEEHCCCCCCEEHHHHHHHHHHHCCCCCCC
HNKEYRLKIKAVQEGFINGFIRLMQKGAEFGLIDSKGLREKASVLALTLDNLSNYPMIGI
CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEECCCCCCCEEEE
QLDVTAVWRQAVTSLLSKGEFK
EEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA