| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is fur [H]
Identifier: 226950252
GI number: 226950252
Start: 3231137
End: 3231619
Strand: Direct
Name: fur [H]
Synonym: CLM_3207
Alternate gene names: 226950252
Gene position: 3231137-3231619 (Clockwise)
Preceding gene: 226950248
Following gene: 226950258
Centisome position: 77.76
GC content: 21.95
Gene sequence:
>483_bases ATGTCAAAGGAATTAGAATTTTATAAACATATTTTTCACTCTAATAATATCAAACTTACAACTAAACGAATTATGATTTT AAAAATTTTCTTTGATAATAAAAATGATCATTTAACAGCAAATGAAATTTACTATTTAGTAAAAAAAATTTGTCCGTCAA TTGGCTTAGCTACTGTTTATAGAACCATTCAAACATTATTAAAACTAGATTTGTTAGAACATTTATTATTGGAAGGTAGA GTTAATTGTTATAAACTATTTTTTAATGAAGATACAAATTTTGAAGTTCATAATAAACATCATCCTCATCTTATTTGCCT TGGTTGTAAAAAAATTATAGATTGTCGATATGACTTTAGTCAATATAACTTTATTAATACTGTTAAAAATCAAATAAATA AAGACTTTTTGTTCAAAATTACTGATTTCGAAATGAATTTCTATGGATATTGTGAGAAATGTTCTGATAAAAAAAGCAAA TAA
Upstream 100 bases:
>100_bases AATTATTTAATGATTTTATTTAAATAAATAGAATAATATAATGTCTTTATATCCAAATTTTATGCTTATTACTTAACACT AAAGTTTAAGGAGAATCTAT
Downstream 100 bases:
>100_bases TAGATTTCGTGCATATAAATATTATTTTTATTAATGCTATTTATATTAAAAGAATTTACTTAACCCATTTAAATATGTAT ATAATAGTGTTTTAAATTTT
Product: Fur family transcriptional regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSKELEFYKHIFHSNNIKLTTKRIMILKIFFDNKNDHLTANEIYYLVKKICPSIGLATVYRTIQTLLKLDLLEHLLLEGR VNCYKLFFNEDTNFEVHNKHHPHLICLGCKKIIDCRYDFSQYNFINTVKNQINKDFLFKITDFEMNFYGYCEKCSDKKSK
Sequences:
>Translated_160_residues MSKELEFYKHIFHSNNIKLTTKRIMILKIFFDNKNDHLTANEIYYLVKKICPSIGLATVYRTIQTLLKLDLLEHLLLEGR VNCYKLFFNEDTNFEVHNKHHPHLICLGCKKIIDCRYDFSQYNFINTVKNQINKDFLFKITDFEMNFYGYCEKCSDKKSK >Mature_159_residues SKELEFYKHIFHSNNIKLTTKRIMILKIFFDNKNDHLTANEIYYLVKKICPSIGLATVYRTIQTLLKLDLLEHLLLEGRV NCYKLFFNEDTNFEVHNKHHPHLICLGCKKIIDCRYDFSQYNFINTVKNQINKDFLFKITDFEMNFYGYCEKCSDKKSK
Specific function: Iron uptake repressor. Acts on the transcription of ferri-siderophore uptake genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=136, Percent_Identity=27.9411764705882, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 19208; Mature: 19076
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKELEFYKHIFHSNNIKLTTKRIMILKIFFDNKNDHLTANEIYYLVKKICPSIGLATVY CCCHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCHHHHH RTIQTLLKLDLLEHLLLEGRVNCYKLFFNEDTNFEVHNKHHPHLICLGCKKIIDCRYDFS HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCEEEEECHHHHHHCCCCCH QYNFINTVKNQINKDFLFKITDFEMNFYGYCEKCSDKKSK HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCC >Mature Secondary Structure SKELEFYKHIFHSNNIKLTTKRIMILKIFFDNKNDHLTANEIYYLVKKICPSIGLATVY CCHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCHHHHH RTIQTLLKLDLLEHLLLEGRVNCYKLFFNEDTNFEVHNKHHPHLICLGCKKIIDCRYDFS HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCEEEEECHHHHHHCCCCCH QYNFINTVKNQINKDFLFKITDFEMNFYGYCEKCSDKKSK HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9701813 [H]